Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeotremella_20fagi_20[genbank_20GCA_5F001599715.1_202016-03-01] 30 sequences; 22,649,946 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq13 127 3e-24 seq1 93.3 6e-14 >seq13 Length=1031976 Score = 127 bits (140), Expect = 3e-24 Identities = 144/191 (75%), Gaps = 4/191 (2%) Strand=Plus/Plus Query 155847 ACTGGAAAAACTATTACATTAGAAGTCGAAGATTCTGATAATATTTTAAACGTGAAAAAT 155906 || || ||||| || || | ||||||||| ||||||| ||| ||||| ||| Sbjct 993727 ACCGGTAAAACCATCACCCTCGAAGTCGAATCCTCTGATACTATCGATAACGTTAAATCC 993786 Query 155907 AAAATACAAGATAAAGAAGGCATACCTCCAGAACAACAAAGATTGATTTATGCCGGTAAG 155966 ||||| |||||||||||||| || || ||||| ||||||||| | || | ||||||||| Sbjct 993787 AAAATCCAAGATAAAGAAGGTATCCCCCCAGACCAACAAAGACTCATCTTTGCCGGTAAA 993846 Query 155967 CAGCTCGAAGATACCAGAACTTTATCAGATTATAATATATCCAAA--GAGGCGACGCTTC 156024 ||| | |||||| ||||| || || ||||| | ||||||||| ||| | || |||| Sbjct 993847 CAGTTGGAAGATGGTAGAACCTTGTCTGATTACA--ATATCCAAAAGGAGTCTACACTTC 993904 Query 156025 ATTTAGTGTTA 156035 |||| || ||| Sbjct 993905 ATTTGGTTTTA 993915 Score = 114 bits (126), Expect = 2e-20 Identities = 153/211 (73%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||| || | ||||| | || ||||| ||||| || | ||||| ||| ||| Sbjct 993420 ATGCAAATTTTCGTCAAAACCCTCACCGGAAAGACTATCACCCTCGAAGTTGAATCATCT 993479 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| ||| || || || |||||| ||||| ||||| || || || ||||| ||| Sbjct 993480 GATACTATCGACAATGTCAAGTCTAAAATTCAAGACAAAGAGGGTATCCCACCAGACCAA 993539 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || |||||||| | || ||||| || | |||||| ||||||||||| ||||| | Sbjct 993540 CAGAGATTGATCTTCGCTGGTAAACAATTGGAAGATGGTAGAACTTTATCGGATTACA-- 993597 Query 156003 ATATCCAAA--GAGGCGACGCTTCATTTAGT 156031 | ||||||| || | || |||||||| || Sbjct 993598 ACATCCAAAAGGAATCAACTCTTCATTTGGT 993628 Score = 96.9 bits (106), Expect = 5e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||| || | ||||| | ||||| ||||| || || || ||||| ||| || Sbjct 993192 ATGCAAATCTTCGTCAAAACTCTTACTGGTAAAACCATCACTTTGGAAGTTGAATCATCC 993251 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | || ||||| ||| || || ||||| ||||| || || || ||||| ||| Sbjct 993252 GACACCATCGACAACGTTAAATCCAAGATCCAAGACAAAGAGGGTATCCCACCAGATCAA 993311 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 ||||||||||||| |||||||| || | || || | || | ||||| || || Sbjct 993312 CAAAGATTGATTTTCGCCGGTAAACAATTAGAGGACGGTCGTACACTCTCAGACTACAAC 993371 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050 || ||||| | || |||||||| || | |||||| | || ||| Sbjct 993372 ATTCAAAAAGAATCAACCCTTCATTTGGTTCTTAGATTACGTGGTGGT 993419 Score = 93.3 bits (102), Expect = 6e-14 Identities = 119/164 (73%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 18155 AAACACGCAAAATCAGTGTGTAAACCTTCATCTCTGGATATTAATTCGTTACTAAACGTT 18214 ||||| || ||||||||||| | ||||||||| | ||| || | |||||| || || Sbjct 742121 AAACAAGCGAAATCAGTGTGAAGACCTTCATCACGGGAGATGAGTTCGTTGGAGAAAGTC 742062 Query 18215 AACCCGGGCATTATACCTCttttttttAGCCAAAATATCGATGCGAAACTACTAGAAAAG 18274 || || ||||| | ||| | ||| || ||||| || || || |||||| | |||||| Sbjct 742061 AATCCTGGCATCAAACCACGTTTCTTGAGCCAGAAGATGGAAGCGAAAGATCCTGAAAAG 742002 Query 18275 AATATACCCTCAACGCACGCGAACGCTATTAATCTTTCAGCAAA 18318 || ||||| || || ||||| || || ||||| || || || Sbjct 742001 AAGATACCTTCGACAGCGGCGAAGGCGATCAATCTCTCGGCGAA 741958 >seq1 Length=2409791 Score = 93.3 bits (102), Expect = 6e-14 Identities = 117/159 (74%), Gaps = 4/159 (3%) Strand=Plus/Minus Query 155895 AACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAACAAAGATTGATT 155954 ||||| ||| ||||| |||||||||||||| || || ||||| |||||| | ||||| Sbjct 586258 AACGTTAAATCCAAAATCCAAGATAAAGAAGGTATCCCACCAGACCAACAACGTTTGATC 586199 Query 155955 TATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAATATATCCAAA--G 156012 | || ||||| || | ||||| |||||| | |||||||| | | ||||||| | Sbjct 586198 TTCGCTGGTAAACAATTGGAAGACGGTAGAACTCTTTCAGATTACA--ACATCCAAAAGG 586141 Query 156013 AGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGTG 156051 | | || |||||||| || | |||||| | || |||| Sbjct 586140 AATCTACCCTTCATTTGGTTCTTAGATTACGTGGTGGTG 586102 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 731871725548000