Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeotremella_20fagi_20[genbank_20GCA_5F001599715.1_202016-03-01] 30 sequences; 22,649,946 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq13 154 3e-32 seq2 116 7e-21 seq1 104 5e-17 >seq13 Length=1031976 Score = 154 bits (170), Expect = 3e-32 Identities = 172/230 (75%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 ||||||||||| ||||| | || ||||| | ||| | || || ||| || ||||| Sbjct 993649 ATACCACCTCTGAGACGAAGGACCAAATGAAGAGTTGATTCCTTTTGGATGTTGTAATCC 993590 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 ||||| |||| |||| ||||||||||||||||| ||||| ||||||||||| || ||| Sbjct 993589 GATAAAGTTCTACCATCTTCCAATTGTTTACCAGCGAAGATCAATCTCTGTTGGTCTGGT 993530 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || || ||||| ||||| |||||| || ||||| |||| ||| || ||||| Sbjct 993529 GGGATACCCTCTTTGTCTTGAATTTTAGACTTGACATTGTCGATAGTATCAGATGATTCA 993470 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||| || || || || || || || | ||||| | || || ||||| Sbjct 993469 ACTTCGAGGGTGATAGTCTTTCCGGTGAGGGTTTTGACGAAAATTTGCAT 993420 Score = 154 bits (170), Expect = 3e-32 Identities = 156/203 (77%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 192310 CCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGAT 192369 ||||| | |||||||| || ||||| | |||| ||| || |||||| |||||||| Sbjct 993929 CCACCACGTAGACGTAAAACCAAATGAAGTGTAGACTCCTTTTGGATATTGTAATCAGAC 993870 Query 192370 AATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGT 192429 || |||| |||| ||||| |||||||| |||||||| | ||| ||||| || || || Sbjct 993869 AAGGTTCTACCATCTTCCAACTGTTTACCGGCAAAGATGAGTCTTTGTTGGTCTGGGGGG 993810 Query 192430 ATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACT 192489 || |||||||||||||| ||||| ||| || ||| |||| ||| || ||||| ||| Sbjct 993809 ATACCTTCTTTATCTTGGATTTTGGATTTAACGTTATCGATAGTATCAGAGGATTCGACT 993750 Query 192490 TCTAGAGTAATGGTTTTACCAGT 192512 || || || ||||||||||| || Sbjct 993749 TCGAGGGTGATGGTTTTACCGGT 993727 Score = 125 bits (138), Expect = 1e-23 Identities = 137/182 (75%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 192355 ATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTC 192414 || || ||||| || | ||| || |||| || |||||||||||||| || || || | | Sbjct 993145 ATGTTGTAATCGGAGAGTGTACGACCATCCTCTAATTGTTTACCAGCGAAAATCAAACGC 993086 Query 192415 TGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAA 192474 ||||| || ||||| |||||||| || ||||| || || ||| || ||| || | Sbjct 993085 TGTTGGTCTGGTGGAATTCCTTCCTTGTCTTGGATCTTGGATTTAACGTTATCAATGGTG 993026 Query 192475 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGC 192534 ||||| ||||| ||||| || || || ||||||||||| | ||||||| ||| || ||| Sbjct 993025 TCTGAAGATTCGACTTCAAGGGTGATAGTTTTACCAGTAAGAGTTTTAACAAAGATTTGC 992966 Query 192535 AT 192536 || Sbjct 992965 AT 992964 Score = 104 bits (114), Expect = 5e-17 Identities = 132/182 (73%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 192355 ATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTC 192414 || || || || || | ||| || | || || ||||||||||| || || || ||||| Sbjct 993373 ATGTTGTAGTCTGAGAGTGTACGACCGTCCTCTAATTGTTTACCGGCGAAAATCAATCTT 993314 Query 192415 TGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAA 192474 |||||||| ||||| || || ||||| ||||| || || ||| || || || | Sbjct 993313 TGTTGATCTGGTGGGATACCCTCTTTGTCTTGGATCTTGGATTTAACGTTGTCGATGGTG 993254 Query 192475 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGC 192534 || || ||||| ||||| | ||| |||||||||||||| | ||||| | || || ||| Sbjct 993253 TCGGATGATTCAACTTCCAAAGTGATGGTTTTACCAGTAAGAGTTTTGACGAAGATTTGC 993194 Query 192535 AT 192536 || Sbjct 993193 AT 993192 Score = 102 bits (112), Expect = 2e-16 Identities = 101/131 (77%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 192382 TCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTA 192441 || ||||||||||||||||||||||| || | |||||||||||||| || ||||| || Sbjct 992515 TCTTCCAATTGTTTACCAGCAAAGATCAAACGTTGTTGATCAGGTGGGATACCTTCCTTG 992456 Query 192442 TCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATG 192501 ||||| || || ||| ||||| || | || || ||||| || || || || ||| Sbjct 992455 TCTTGAATCTTGGATTTGACATTGTCAATGGTGTCAGAGGATTCAACCTCGAGTGTGATG 992396 Query 192502 GTTTTACCAGT 192512 |||||||| || Sbjct 992395 GTTTTACCCGT 992385 Score = 93.3 bits (102), Expect = 8e-14 Identities = 165/241 (68%), Gaps = 0/241 (0%) Strand=Plus/Minus Query 49821 AAACATGCAAAATCAGTATGTAAACCCTCGTCCCTAGATATAAATTCATTACTAAAAGTT 49880 ||||| || |||||||| || | ||| || || | || || | ||| || ||||| Sbjct 742121 AAACAAGCGAAATCAGTGTGAAGACCTTCATCACGGGAGATGAGTTCGTTGGAGAAAGTC 742062 Query 49881 AATCCTGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAAG 49940 ||||||||||| || || | || || ||||| || || || || ||| | |||||| Sbjct 742061 AATCCTGGCATCAAACCACGTTTCTTGAGCCAGAAGATGGAAGCGAAAGATCCTGAAAAG 742002 Query 49941 AATATACCCTCGACACACGCAAATGCTATTATTCTTGCTCCAAACATTAATTTATCATCT 50000 || ||||| |||||| || || || || | ||| | | || || || || ||| Sbjct 742001 AAGATACCTTCGACAGCGGCGAAGGCGATCAATCTCTCGGCGAATGTTGATCGTTCGTCT 741942 Query 50001 AATATCCAATTTATAGCCCAATCTGCtttttttttGATAGAAGGTATATTTTCTATAGCT 50060 | ||||| || | ||||||||| || ||||| |||| | || || | || || ||| Sbjct 741941 GAGATCCATTTGAGAGCCCAATCAGCCTTTTTGGCGATACATGGGATGGTGTCGATGGCT 741882 Query 50061 T 50061 | Sbjct 741881 T 741881 >seq2 Length=2299803 Score = 116 bits (128), Expect = 7e-21 Identities = 117/152 (77%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 192361 TAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGA 192420 || ||||| | ||||| | |||| ||||||||||||||||| || ||||||| ||||| Sbjct 838529 TAGTCAGAAAGTGTTCTTCCATCTTCCAATTGTTTACCAGCGAAAATTAATCGTTGTTGG 838588 Query 192421 TCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGAC 192480 || ||||| ||||||||||||||||| || || ||| || || || | || || Sbjct 838589 TCTGGTGGGATTCCTTCTTTATCTTGGATCTTGGATTTGACGTTGTCGATGGTGTCGGAT 838648 Query 192481 GATTCTACTTCTAGAGTAATGGTTTTACCAGT 192512 ||||| || || ||||||||||| || || || Sbjct 838649 GATTCGACCTCGAGAGTAATGGTCTTTCCCGT 838680 >seq1 Length=2409791 Score = 104 bits (114), Expect = 5e-17 Identities = 134/185 (72%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 192328 ACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGATAATGTTCGTTCATCATCC 192387 || ||||| | |||| || || ||| || ||||| || | |||| | || ||| Sbjct 586122 ACCAAATGAAGGGTAGATTCCTTTTGGATGTTGTAATCTGAAAGAGTTCTACCGTCTTCC 586181 Query 192388 AATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGT 192447 |||||||||||||| ||||| || | ||||| || ||||| || |||||||||||||| Sbjct 586182 AATTGTTTACCAGCGAAGATCAAACGTTGTTGGTCTGGTGGGATACCTTCTTTATCTTGG 586241 Query 192448 ATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTA 192507 ||||| ||| || ||| || | || || || || || || || || ||||||||| Sbjct 586242 ATTTTGGATTTAACGTTATCGATGGTGTCGGATGACTCAACCTCGAGGGTGATGGTTTTA 586301 Query 192508 CCAGT 192512 || || Sbjct 586302 CCCGT 586306 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984479621590500