Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeotremella_20fagi_20[genbank_20GCA_5F001599715.1_202016-03-01] 30 sequences; 22,649,946 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq13 149 1e-30 seq2 114 2e-20 seq1 114 2e-20 >seq13 Length=1031976 Score = 149 bits (164), Expect = 1e-30 Identities = 171/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 ||||||||||| || || | || ||||| | ||| | || || || || ||||| Sbjct 993649 ATACCACCTCTGAGACGAAGGACCAAATGAAGAGTTGATTCCTTTTGGATGTTGTAATCC 993590 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 ||||||| || | || ||||||||||||||||| || || |||||||||||||| ||| Sbjct 993589 GATAAAGTTCTACCATCTTCCAATTGTTTACCAGCGAAGATCAATCTCTGTTGGTCTGGT 993530 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || || ||||| ||||| |||||| || ||||| |||||||| || ||||| Sbjct 993529 GGGATACCCTCTTTGTCTTGAATTTTAGACTTGACATTGTCGATAGTATCAGATGATTCA 993470 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||| || || || || || || || | ||||| | ||| || ||||| Sbjct 993469 ACTTCGAGGGTGATAGTCTTTCCGGTGAGGGTTTTGACGAAAATTTGCAT 993420 Score = 136 bits (150), Expect = 7e-27 Identities = 152/203 (75%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 171843 CCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGAT 171902 ||||| | || ||||| || ||||| | |||| ||| || ||||| ||||| || Sbjct 993929 CCACCACGTAGACGTAAAACCAAATGAAGTGTAGACTCCTTTTGGATATTGTAATCAGAC 993870 Query 171903 AAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGT 171962 || | || | || ||||| |||||||| ||||| || | ||| |||||||| || || Sbjct 993869 AAGGTTCTACCATCTTCCAACTGTTTACCGGCAAAGATGAGTCTTTGTTGGTCTGGGGGG 993810 Query 171963 ATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACT 172022 || |||||||||||||| ||||| ||| || ||| |||||||| || ||||| ||| Sbjct 993809 ATACCTTCTTTATCTTGGATTTTGGATTTAACGTTATCGATAGTATCAGAGGATTCGACT 993750 Query 172023 TCTAGAGTAATGGTTTTACCAGT 172045 || || || ||||||||||| || Sbjct 993749 TCGAGGGTGATGGTTTTACCGGT 993727 Score = 123 bits (136), Expect = 5e-23 Identities = 142/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 171879 TCTTTAGAAATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAA 171938 ||||| ||| || ||||| || | | || | || || |||||||||||||| ||| Sbjct 993154 TCTTTTTGAATGTTGTAATCGGAGAGTGTACGACCATCCTCTAATTGTTTACCAGCGAAA 993095 Query 171939 ATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTA 171998 || || | ||||||||| ||||| |||||||| || ||||| || || ||| || ||| Sbjct 993094 ATCAAACGCTGTTGGTCTGGTGGAATTCCTTCCTTGTCTTGGATCTTGGATTTAACGTTA 993035 Query 171999 GTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATG 172058 || || ||||| ||||| ||||| || || || ||||||||||| | ||||||| Sbjct 993034 TCAATGGTGTCTGAAGATTCGACTTCAAGGGTGATAGTTTTACCAGTAAGAGTTTTAACA 992975 Query 172059 AATATCTGCAT 172069 || || ||||| Sbjct 992974 AAGATTTGCAT 992964 Score = 118 bits (130), Expect = 2e-21 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 |||||||| | | || | || ||||| | || | ||||| ||| || || ||| Sbjct 993421 ATACCACCACGTAATCTAAGAACCAAATGAAGGGTTGATTCTTTTTGAATGTTGTAGTCT 993362 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | | || |||| || ||||||||||| || ||||| ||||| ||||| || ||| Sbjct 993361 GAGAGTGTACGACCGTCCTCTAATTGTTTACCGGCGAAAATCAATCTTTGTTGATCTGGT 993302 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || || ||||| ||||| || || ||| || || || || || || ||||| Sbjct 993301 GGGATACCCTCTTTGTCTTGGATCTTGGATTTAACGTTGTCGATGGTGTCGGATGATTCA 993242 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||| | ||| |||||||||||||| | ||||| | ||| || ||||| Sbjct 993241 ACTTCCAAAGTGATGGTTTTACCAGTAAGAGTTTTGACGAAGATTTGCAT 993192 Score = 104 bits (114), Expect = 4e-17 Identities = 114/152 (75%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 171894 TAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGG 171953 || ||||| | || || |||| |||||||||||||||||||| || || | ||||| Sbjct 992536 TAGTCTGAAAGAGTTCTACCGTCTTCCAATTGTTTACCAGCAAAGATCAAACGTTGTTGA 992477 Query 171954 TCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGAC 172013 |||||||| || ||||| || ||||| || || ||| ||||| || || || || Sbjct 992476 TCAGGTGGGATACCTTCCTTGTCTTGAATCTTGGATTTGACATTGTCAATGGTGTCAGAG 992417 Query 172014 GATTCTACTTCTAGAGTAATGGTTTTACCAGT 172045 ||||| || || || || ||||||||||| || Sbjct 992416 GATTCAACCTCGAGTGTGATGGTTTTACCCGT 992385 Score = 98.7 bits (108), Expect = 2e-15 Identities = 113/152 (74%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 171894 TAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGG 171953 ||||| || | || || |||| || | ||||||||| || ||||| || | |||||| Sbjct 992861 TAATCGGAAAGAGTACGGCCGTCTTCGAGTTGTTTACCGGCGAAAATCAAACGTTGTTGG 992802 Query 171954 TCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGAC 172013 || ||||| ||||||||||| ||||| || ||| || || || || || ||||| Sbjct 992801 TCTGGTGGGATTCCTTCTTTGTCTTGGATCTTAGACTTGACGTTGTCAATGGTGTCTGAA 992742 Query 172014 GATTCTACTTCTAGAGTAATGGTTTTACCAGT 172045 || || || || || || |||||||||||||| Sbjct 992741 GACTCGACCTCAAGGGTGATGGTTTTACCAGT 992710 Score = 84.2 bits (92), Expect = 4e-11 Identities = 165/244 (68%), Gaps = 0/244 (0%) Strand=Plus/Minus Query 39120 AGTAAACATGCAAAATCCGTATGTAAACCTTCGTCCCTAGATATAAATTCATTACTAAAA 39179 || ||||| || ||||| || || | |||||| || | || || | ||| || ||| Sbjct 742124 AGCAAACAAGCGAAATCAGTGTGAAGACCTTCATCACGGGAGATGAGTTCGTTGGAGAAA 742065 Query 39180 GTTAATCCTGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAA 39239 || ||||||||||| || || | || || ||||| || || || || ||| | ||| Sbjct 742064 GTCAATCCTGGCATCAAACCACGTTTCTTGAGCCAGAAGATGGAAGCGAAAGATCCTGAA 742005 Query 39240 AAGAATATACCCTCCACACACGCAAATGCTATTATTCTTGCTCCAAACATTAATTTATCA 39299 ||||| ||||| || ||| || || || || | ||| | | || || || || Sbjct 742004 AAGAAGATACCTTCGACAGCGGCGAAGGCGATCAATCTCTCGGCGAATGTTGATCGTTCG 741945 Query 39300 TCTAAAATCCAATTTATGGCCCAATCTGCtttttttttGATAGAAGGTATATTTTCTATA 39359 ||| | ||||| || | |||||||| || ||||| |||| | || || | || || Sbjct 741944 TCTGAGATCCATTTGAGAGCCCAATCAGCCTTTTTGGCGATACATGGGATGGTGTCGATG 741885 Query 39360 GCTT 39363 |||| Sbjct 741884 GCTT 741881 >seq2 Length=2299803 Score = 114 bits (126), Expect = 2e-20 Identities = 104/131 (79%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 171915 TCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTA 171974 || ||||||||||||||||| |||||||||| |||||||| ||||| |||||||||||| Sbjct 838550 TCTTCCAATTGTTTACCAGCGAAAATTAATCGTTGTTGGTCTGGTGGGATTCCTTCTTTA 838609 Query 171975 TCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATG 172034 ||||| || || ||| || || || || || || ||||| || || ||||||||| Sbjct 838610 TCTTGGATCTTGGATTTGACGTTGTCGATGGTGTCGGATGATTCGACCTCGAGAGTAATG 838669 Query 172035 GTTTTACCAGT 172045 || || || || Sbjct 838670 GTCTTTCCCGT 838680 >seq1 Length=2409791 Score = 114 bits (126), Expect = 2e-20 Identities = 120/158 (76%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 171888 ATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTC 171947 || || |||||||| | || || |||| ||||||||||||||||| || || || | Sbjct 586149 ATGTTGTAATCTGAAAGAGTTCTACCGTCTTCCAATTGTTTACCAGCGAAGATCAAACGT 586208 Query 171948 TGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTA 172007 |||||||| ||||| || |||||||||||||| ||||| ||| || ||| || || Sbjct 586209 TGTTGGTCTGGTGGGATACCTTCTTTATCTTGGATTTTGGATTTAACGTTATCGATGGTG 586268 Query 172008 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGT 172045 || || || || || || || || ||||||||||| || Sbjct 586269 TCGGATGACTCAACCTCGAGGGTGATGGTTTTACCCGT 586306 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 905135660574000