Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeotremella_20fagi_20[genbank_20GCA_5F001599715.1_202016-03-01] 30 sequences; 22,649,946 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq13 122 1e-22 seq1 84.2 3e-11 >seq13 Length=1031976 Score = 122 bits (134), Expect = 1e-22 Identities = 166/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAA-CATAAC 146090 ||||||| ||| | ||||| | || ||||| || || || | || || ||| ||| Sbjct 993421 TGCAAATTTTCGTCAAAACCCTCACCGGAAAGACTATCACCCTCGAAGTTGAATCATCT- 993479 Query 146091 GATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAA 146150 |||||||| | ||||| || |||||| ||| ||||| || || ||||| || ||| Sbjct 993480 GATACTATCGACAATGTCAAGTCTAAAATTCAAGACAAAGAGGGTATCCCACCAGACCAA 993539 Query 146151 CAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAAT 146210 || ||| | || || || ||||||||||| || ||| |||||| ||| | ||||| || Sbjct 993540 CAGAGATTGATCTTCGCTGGTAAACAATTGGAAGATGGTAGAACTTTATCGGATTACAAC 993599 Query 146211 ATACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259 || ||||| ||||| ||| | ||||| || | || | ||||| |||| Sbjct 993600 ATCCAAAAGGAATCAACTCTTCATTTGGTCCTTCGTCTCAGAGGTGGTA 993648 Score = 113 bits (124), Expect = 7e-20 Identities = 118/155 (76%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 146091 GATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAA 146150 |||||||| | || || ||| ||||| ||| ||||||||| || || || || ||| Sbjct 993763 GATACTATCGATAACGTTAAATCCAAAATCCAAGATAAAGAAGGTATCCCCCCAGACCAA 993822 Query 146151 CAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAAT 146210 ||||||||||| ||||| |||||||| || || ||| |||||| || | ||||| ||| Sbjct 993823 CAAAGACTCATCTTTGCCGGTAAACAGTTGGAAGATGGTAGAACCTTGTCTGATTACAAT 993882 Query 146211 ATACAAAAAGAATCGACTATCCATTTAGTATTACG 146245 || ||||| || || || | ||||| || ||||| Sbjct 993883 ATCCAAAAGGAGTCTACACTTCATTTGGTTTTACG 993917 Score = 109 bits (120), Expect = 9e-19 Identities = 163/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAA-CATAAC 146090 ||||||| ||| | ||||| | || || ||||| || ||| | || || ||| ||| | Sbjct 993193 TGCAAATCTTCGTCAAAACTCTTACTGGTAAAACCATCACTTTGGAAGTTGAATCATC-C 993251 Query 146091 GATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAA 146150 || || || | || || ||| || || ||| ||||| || || ||||| |||||| Sbjct 993252 GACACCATCGACAACGTTAAATCCAAGATCCAAGACAAAGAGGGTATCCCACCAGATCAA 993311 Query 146151 CAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAAT 146210 |||||| | ||||| || |||||||||||||| || | | || | |||| || || Sbjct 993312 CAAAGATTGATTTTCGCCGGTAAACAATTAGAGGACGGTCGTACACTCTCAGACTACAAC 993371 Query 146211 ATACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259 || ||||||||||| || | ||||| || | ||||| | || |||| Sbjct 993372 ATTCAAAAAGAATCAACCCTTCATTTGGTTCTTAGATTACGTGGTGGTA 993420 Score = 96.9 bits (106), Expect = 5e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || | ||||| | || || ||||| || || |||| || ||| | | Sbjct 992965 TGCAAATCTTTGTTAAAACTCTTACTGGTAAAACTATCACCCTTGAAGTCGAATCTTCAG 993024 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || ||| | || || ||| || || ||| || ||||| |||||||| || |||| Sbjct 993025 ACACCATTGATAACGTTAAATCCAAGATCCAAGACAAGGAAGGAATTCCACCAGACCAAC 993084 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | | | ||||| || |||||||||||||| ||| | | || | | ||||| || | Sbjct 993085 AGCGTTTGATTTTCGCTGGTAAACAATTAGAGGATGGTCGTACACTCTCCGATTACAACA 993144 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259 | ||||||||||| || |||| || || | ||||| | || |||| Sbjct 993145 TTCAAAAAGAATCCACCCTCCACTTGGTTCTCAGATTACGTGGTGGTA 993192 >seq1 Length=2409791 Score = 84.2 bits (92), Expect = 3e-11 Identities = 105/144 (73%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 146115 AAAATACAACTTAAAGAAGGCATTCCACCCGATCAACAAAGACTCATTTTTGCAGGTAAA 146174 ||||| ||| ||||||||| || ||||| || |||||| | | || || || |||||| Sbjct 586246 AAAATCCAAGATAAAGAAGGTATCCCACCAGACCAACAACGTTTGATCTTCGCTGGTAAA 586187 Query 146175 CAATTAGATGATAATAGAACGTTAACAGATTATAATATACAAAAAGAATCGACTATCCAT 146234 ||||| || || |||||| | ||||||| || || ||||| ||||| || | ||| Sbjct 586186 CAATTGGAAGACGGTAGAACTCTTTCAGATTACAACATCCAAAAGGAATCTACCCTTCAT 586127 Query 146235 TTAGTATTACGATTAAGAGGAGGT 146258 || || | ||||| | || ||| Sbjct 586126 TTGGTTCTTAGATTACGTGGTGGT 586103 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 786166105187600