Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeotremella_20fagi_20[genbank_20GCA_5F001599715.1_202016-03-01] 30 sequences; 22,649,946 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq1 132 4e-25 seq2 100 2e-15 seq8 96.9 3e-14 >seq1 Length=2409791 Score = 132 bits (146), Expect = 4e-25 Identities = 217/313 (69%), Gaps = 0/313 (0%) Strand=Plus/Plus Query 282152 TTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCACCTCCC 282211 ||||||||||| |||| ||| | | || ||||| || || ||||||||||| ||| Sbjct 1252666 TTTCTCTTGAATTCTTGAACGAAGTGGTTAACGAGACGGTTGTCGAAATCTTCACCACCC 1252725 Query 282212 AATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGA 282271 || | ||| | || | |||||| | |||| ||| | || ||||| | | | ||| Sbjct 1252726 AAATGAGTGTCACCAGCAGTAGCTTTAACTTCGAAGATACCTTCTTCGATGGTAAGAAGG 1252785 Query 282272 GTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGG 282331 | ||||| || ||||| || | ||| || || || || ||| |||| || Sbjct 1252786 GAGACATCGAAAGTACCACCTCCGAGATCGAAGATGAGGACGTTCTTTTCACCTTCAGTC 1252845 Query 282332 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 282391 || || |||||||| || || | ||| || |||||||| || || || || | | || Sbjct 1252846 TTCTTGTCAAGACCGTAAGCGATAGCGGCGGCAGTTGGCTCGTTGATGATACGGAGGACG 1252905 Query 282392 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 282451 | ||||||||| || | || || ||||| || ||||| | ||| |||||||| || || Sbjct 1252906 TCAAGACCAGCGATCATACCAGCGTCTTTGGTAGCTTGACGTTGGGAATCGTTGAAGTAA 1252965 Query 282452 GCAGGAACAGTAA 282464 || || ||||||| Sbjct 1252966 GCTGGGACAGTAA 1252978 Score = 125 bits (138), Expect = 5e-23 Identities = 433/667 (65%), Gaps = 10/667 (1%) Strand=Plus/Plus Query 281441 ATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGT 281500 || || ||||| || | ||| |||| || |||| |||||| || || | |||| ||| Sbjct 1251907 ATTCCGTTGGCGTCAACATCGAATGAAACCTCAACTTGAGGAACACCACGAGGAGCTGGT 1251966 Query 281501 GGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTCA 281560 ||||| || | | | ||| | || || ||| || || || |||||| Sbjct 1251967 GGGATACCGGCAAGTTCGAATTTACCGAGTAAGTTACAGTCCTTCGTCTTGGCACGTTCA 1252026 Query 281561 CCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCTG 281620 || ||| ||| |||||| || ||| ||| ||||| || || || | || | | | Sbjct 1252027 CCTTCGTAAACTTGGATCAAGACACCAGGTTGGTTATCGGAGTAGGTGGAGAAGATTTCG 1252086 Query 281621 GATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTG-GTCATAATACCACCAGC 281679 ||||| || || | || |||||||| | || | || | ||||| ||||||||||| Sbjct 1252087 GATTTCTTGGTTGGGACAGTGGTGTTTCTCTTGATTA-ATGGAGTCATGATACCACCAGC 1252145 Query 281680 TGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGA--AGTTTT 281737 ||||| | ||| | ||| ||||||| |||||| | || | | || |||| || | Sbjct 1252146 AGTTTCGATACCCATAGAGAGAGGAGCGACATCGAGGAGCAAGAGATCTTGAGTAGCCTC 1252205 Query 281738 TCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCA 281797 | | ||| | ||| ||| ||||| ||||||| ||| ||||| || || ||||||||| Sbjct 1252206 TGA--AGTGTCACCGGTAAGGATAGCAGCTTGAACAGCGGCACCGTAAGCGACAGCTTCA 1252263 Query 281798 TCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTGTCTT 281857 || || || | | | ||| ||| |||| ||| | | ||||| |||| | Sbjct 1252264 TCTGGGTTGATGGATCTGTTTGGTTCACGACCAGAGAACATGTCTGAAACGAGTTTTTGG 1252323 Query 281858 ACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTTATCC 281917 | || || ||||||| || || || || | || ||||| | || | ||||| || Sbjct 1252324 ATTTTGGGGATACGAGTGGAACCACCGACAAGGACGATTTCGTTGACGTTGGATTTGTCG 1252383 Query 281918 AGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGCTCTAAACAAGTCTGAA 281977 | ||| || || | ||| || || || || || | | | || | ||| | Sbjct 1252384 ATTTTAGAGTCACGGAGAACCTTCTCGACTGGGTCCATGGTTGAACGGAAGAGATCTTGA 1252443 Query 281978 CAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACAT-TATAA-TCAATTCCTTCGAACA 282035 || ||||||||||| ||| | || || || | || || || || || ||||| | Sbjct 1252444 CAGAGTTCTTCGAAACGAGCACGGGT--GATGGAGGTGTAGAAGTCGATACCATCGAAGA 1252501 Query 282036 AAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTCAC 282095 || || | ||| || | ||||||| | || || |||| | |||||||| |||| Sbjct 1252502 GGGAGTCGATTTCGATGGAGGTTTGAGCGGCTGAGGAGAGTGTTCTCTTAGCACGCTCAC 1252561 Query 282096 ATGCTGT 282102 | || || Sbjct 1252562 AAGCGGT 1252568 Score = 93.3 bits (102), Expect = 3e-13 Identities = 144/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 282621 ATGGCCAATATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAATTAATC 282680 |||| ||| |||||| ||| | || | |||||||| ||| | ||| || || | Sbjct 1771892 ATGGGAAATGTTTCATGTCTTTCTTAAGATCTTGGTCATCGAAAGAACGACCGATGAAAC 1771951 Query 282681 GTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCATCTC 282740 |||| || || |||||||| || ||||| | ||||||| ||||||||| || | Sbjct 1771952 GTTTAGCGTCGAAAATAGTGTTAACGGGATTTGAAGGTGCTTGATTTTTGGCTGCGTCAC 1772011 Query 282741 CAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGAT 282800 | | ||| ||||| || || || || | |||||||| | || |||||||||| Sbjct 1772012 CGACTAGACGTTCTTCATCGGTGAAACCGACCCAGGATGGAGTGATACGGTTACCTTGAT 1772071 Query 282801 CATTCGCAATAATTTCAACTTTACCA 282826 | || || || ||||| ||||||||| Sbjct 1772072 CGTTGGCGATGATTTCGACTTTACCA 1772097 >seq2 Length=2299803 Score = 100 bits (110), Expect = 2e-15 Identities = 130/178 (73%), Gaps = 4/178 (2%) Strand=Plus/Plus Query 282284 GTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTA--TCAA 282341 || ||||| || | ||| |||||||| || ||| | |||| |||||| ||| |||| Sbjct 1154044 GTACCACCTCCGAGATCGAAAATAAGAACGTTCTTCTCTTC--CTTGGTCTTTTGGTCAA 1154101 Query 282342 GACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAG 282401 ||||||| |||| |||||||||||||| || || || || | | ||| | |||||||| Sbjct 1154102 GACCATAGGCAATGGCAGCAGCAGTTGGCTCGTTGATGATACGGAGAACCTCAAGACCAG 1154161 Query 282402 CAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAAC 282459 |||| || ||||| || || || | | ||| || ||||| || || || || || Sbjct 1154162 CAATGGCACCAGCATCCTTGGTAGCGAGACGTTGAGAGTCGTTGAAGTAAGCTGGGAC 1154219 Score = 100 bits (110), Expect = 2e-15 Identities = 105/138 (76%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 282331 GTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAAC 282390 |||||| |||||||| || || | |||||| ||||||||||| || |||| | | ||| Sbjct 1610606 GTTTTTGTCAAGACCGTAAGCGAGAGCAGCGGCAGTTGGTTCGTTGATAACACGGAGAAC 1610665 Query 282391 ATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATA 282450 | ||||||||| || || ||||||||||| ||||| | ||| || ||||| || || Sbjct 1610666 CTCAAGACCAGCGATGGAACCAGCATCTTTAGTAGCTTGACGTTGAGAGTCGTTGAAGTA 1610725 Query 282451 TGCAGGAACAGTAATAAC 282468 || || ||||| || || Sbjct 1610726 AGCGGGGACAGTGATGAC 1610743 >seq8 Length=1407489 Score = 96.9 bits (106), Expect = 3e-14 Identities = 106/141 (75%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 435133 GAATTTTTCTTCCAAGTAATGGCTGGTCGTGAAGGTATTATTAATACAGCTATTAAAACT 435192 ||||| |||||||| | |||| ||||||||||||| | ||| |||| ||| | |||||| Sbjct 576720 GAATTCTTCTTCCATGCTATGGGTGGTCGTGAAGGTTTGATTGATACTGCTGTCAAAACT 576661 Query 435193 GCTGATACTGGTTATATTCAAAGAAAACTTGTCAAGATGCTTGAAGATATTAAACAAGAA 435252 ||||| || |||||||| ||| | | ||| |||||| | |||||| | ||| Sbjct 576660 GCTGAAACCGGTTATATCCAACGTAGACTGGTCAAGGCTATGGAAGATTTGAAAGTTTGT 576601 Query 435253 TATGATGGTACAGTGAGAAAT 435273 |||||||| || || || ||| Sbjct 576600 TATGATGGGACGGTTAGGAAT 576580 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740628927126780