Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeotremella_20fagi_20[genbank_20GCA_5F001599715.1_202016-03-01] 30 sequences; 22,649,946 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq13 125 1e-23 seq1 116 7e-21 >seq13 Length=1031976 Score = 125 bits (138), Expect = 1e-23 Identities = 155/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 82599 AGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCT 82658 ||||| ||||| || || |||||||| || || || ||||| || || | | ||| || Sbjct 993175 AGAACCAAGTGGAGGGTGGATTCTTTTTGAATGTTGTAATCGGAGAGTGTACGACCATCC 993116 Query 82659 TCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCT 82718 |||| |||||| ||||| || || | | ||||| ||||| || ||||||||||| ||| Sbjct 993115 TCTAATTGTTTACCAGCGAAAATCAAACGCTGTTGGTCTGGTGGAATTCCTTCCTTGTCT 993056 Query 82719 TGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTC 82778 || ||||| | ||| || || ||||| || || || ||| ||||| | || || || Sbjct 993055 TGGATCTTGGATTTAACGTTATCAATGGTGTCTGAAGATTCGACTTCAAGGGTGATAGTT 992996 Query 82779 TTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || || || | || || ||||| || ||||| Sbjct 992995 TTACCAGTAAGAGTTTTAACAAAGATTTGCAT 992964 Score = 125 bits (138), Expect = 1e-23 Identities = 143/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654 ||| | ||| || || || ||||| || || || ||||| |||||||| | ||||||| Sbjct 993918 ACGTAAAACCAAATGAAGTGTAGACTCCTTTTGGATATTGTAATCAGACAAGGTTCTACC 993859 Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714 ||||| | ||||| || |||||||| ||||||||||| ||||| || || ||||| || Sbjct 993858 ATCTTCCAACTGTTTACCGGCAAAGATGAGTCTTTGTTGGTCTGGGGGGATACCTTCTTT 993799 Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTAT 82774 |||||| || || | ||| || || || || |||||| | ||| ||||| | || || Sbjct 993798 ATCTTGGATTTTGGATTTAACGTTATCGATAGTATCAGAGGATTCGACTTCGAGGGTGAT 993739 Query 82775 CGTCTTGCCTGT 82786 || || || || Sbjct 993738 GGTTTTACCGGT 993727 Score = 122 bits (134), Expect = 2e-22 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 82599 AGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCT 82658 ||||| || || || || |||||||| || || || || || || || | | |||||| Sbjct 993403 AGAACCAAATGAAGGGTTGATTCTTTTTGAATGTTGTAGTCTGAGAGTGTACGACCGTCC 993344 Query 82659 TCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCT 82718 |||| |||||| || || || || | ||||||||||||||| || || || || || ||| Sbjct 993343 TCTAATTGTTTACCGGCGAAAATCAATCTTTGTTGATCTGGTGGGATACCCTCTTTGTCT 993284 Query 82719 TGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTC 82778 || ||||| | ||| || || || || || || | ||| ||||||||||| || || Sbjct 993283 TGGATCTTGGATTTAACGTTGTCGATGGTGTCGGATGATTCAACTTCCAAAGTGATGGTT 993224 Query 82779 TTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || || || | || || || || || ||||| Sbjct 993223 TTACCAGTAAGAGTTTTGACGAAGATTTGCAT 993192 Score = 113 bits (124), Expect = 9e-20 Identities = 95/117 (81%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 82635 TAATCAGATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGA 82694 || || || ||| ||||||||||||| | |||||| ||||||||||| | | ||||||| Sbjct 992536 TAGTCTGAAAGAGTTCTACCGTCTTCCAATTGTTTACCAGCAAAGATCAAACGTTGTTGA 992477 Query 82695 TCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCA 82751 || || || || |||||||| ||||||||||| | ||| ||||| ||||| || ||| Sbjct 992476 TCAGGTGGGATACCTTCCTTGTCTTGAATCTTGGATTTGACATTGTCAATGGTGTCA 992420 >seq1 Length=2409791 Score = 116 bits (128), Expect = 7e-21 Identities = 117/152 (77%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 82599 AGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCT 82658 ||||| || || || |||||||| || || || || ||||| || ||| ||||||||||| Sbjct 586119 AGAACCAAATGAAGGGTAGATTCCTTTTGGATGTTGTAATCTGAAAGAGTTCTACCGTCT 586178 Query 82659 TCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCT 82718 || | |||||| ||||| ||||| | | |||||| ||||| || || ||||| |||||| Sbjct 586179 TCCAATTGTTTACCAGCGAAGATCAAACGTTGTTGGTCTGGTGGGATACCTTCTTTATCT 586238 Query 82719 TGAATCTTTGCTTTTACATTTTCAATCGTATC 82750 || || || | ||| || || || || || || Sbjct 586239 TGGATTTTGGATTTAACGTTATCGATGGTGTC 586270 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981826822610170