Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeotremella_20fagi_20[genbank_20GCA_5F001599715.1_202016-03-01] 30 sequences; 22,649,946 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq8 147 5e-30 seq2 100 7e-16 seq13 95.1 3e-14 seq5 84.2 5e-11 >seq8 Length=1407489 Score = 147 bits (162), Expect = 5e-30 Identities = 404/613 (66%), Gaps = 7/613 (1%) Strand=Plus/Minus Query 110547 GATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAAC-TGCTCTTATTTCTAAAAACTC 110605 ||||| ||||| ||||| || || || || |||| ||||| || ||||||| | Sbjct 620477 GATTCCATTGACGGTATCTACGACACT-TTGAAGATTTGTGCTCAAATCTCTAAAACTGC 620419 Query 110606 TGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATATCGCAACAGC 110665 ||| || || ||| | ||| | || | || || | ||||| || | || || | Sbjct 620418 TGGTGGTATCGGTCTCCACATCCACAACATCCGTGCTAAAGGTTCATACATTGCCGGTAC 620359 Query 110666 GAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTGCAAAATA 110725 || ||| || | || | ||||||||| | |||| ||| ||| || || | ||| Sbjct 620358 CAACGGTTACTCTAACGGTATCGTTCCAATGCTTAGAGCTTTCGACGCTACCGCCAGATA 620299 Query 110726 TGTGAATCAAGGTGGTAA---GAGAAATGGCTCATTTGCTATCTATCTCGAACCTTGGCA 110782 || | ||||||||||| |||| || | || |||||||| |||||||| ||||| Sbjct 620298 CGTCGACCAAGGTGGTAACAAGAGACCAGGTGCTTTCGCTATCTACCTCGAACCATGGCA 620239 Query 110783 TTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAACAAAGAGC 110842 | ||| | || || ||| | || || ||||||||||| || |||||| |||| Sbjct 620238 CGCCGATGTTTTCGATTTCCTCGATCTCCGTAAAAATCACGGTAAAGAAGAAGTTCGAGC 620179 Query 110843 ACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGTTCAAGAAAA 110902 |||||||| || || || | ||||| | ||| | |||||||| ||||| ||| | Sbjct 620178 TCGTGATTTGTTCTACGCTCTCTGGATCCCTGATCTTTTCATGAAGCGTGTCGAAGCCGA 620119 Query 110903 TGGCATGTGGTCTCTTATGTGTCCTCATCGTTCTCCTGGTCTATCTGATGTATATGGAAA 110962 ||| ||| | || |||||||| | | ||| ||||| | ||||| | | Sbjct 620118 TGGAGATTGGACCCTCATGTGTCCAGCTGAATGTCCAGGTCTTGCCGATGTTCACTCTGA 620059 Query 110963 AGAGTTTGAAGACCTTTACGAAAAATATGAAAAAGAAGGCAAGTTTCGCAAACAAATTCC 111022 | |||| | || ||||||||| ||| || |||| || || | | || || Sbjct 620058 AAAGTTCGTCGAGCTTTACGAATCATACGAGAAAGCTGGTAAAGGTAGAAAGACCATCAA 619999 Query 111023 AGCTCAAGAACTTTGGTTCAAAATCCTTGAATCACAAGTTGAAACTGG-AACTCCTTATA 111081 ||||||| ||||||||||| || || ||| | ||| || ||||| ||| |||| | Sbjct 619998 AGCTCAAAAACTTTGGTTCGCTATTCTCGAAGCTCAAACCGAGACTGGCAACCCCTT-CA 619940 Query 111082 TTTTGTATAAAGATCATATTAATCGCAAATCTAATCAAATGAATTTAGGAACAATTAAGT 111141 | | || || || | || |||||| || || || | || ||||| |||| Sbjct 619939 TGCTTTACAAGGACGCTGCCAACTCCAAATCCAACCACCAACATCTTGGTACAATCAAGT 619880 Query 111142 CTAGTAATTTGTG 111154 | ||||| ||||| Sbjct 619879 CAAGTAACTTGTG 619867 >seq2 Length=2299803 Score = 100 bits (110), Expect = 7e-16 Identities = 159/226 (70%), Gaps = 4/226 (2%) Strand=Plus/Plus Query 279875 GATGGTTTGAAACCTTCACAGCGTAAGATTATATTCAGTTGTTTCAAAAGAAAATTGGTA 279934 |||||| | ||||| ||| ||||| ||| | ||| |||||||||| | || ||||| Sbjct 1538614 GATGGTCTTAAACCAGGACAACGTAAAATTTTGTTCGGTTGTTTCAAGCGTAATTTGGTC 1538673 Query 279935 AAGGAAATTCGTGTTGCTCAGTTAGCAGGTTATGTTTCAGAACATGCAGGTTATCATCAC 279994 ||||||||| || ||||| ||||| ||||| || || ||| | | | |||||| || Sbjct 1538674 AAGGAAATTAAAGTGGCTCAATTAGCTGGTTACGTCTCTGAAAAGACCGCTTATCACCAT 1538733 Query 279995 GGTGAAGCGTCTCTTCAAGGTG--CTATTGTAGGTCTTGCCCAAGATTTTATGGCTTCAA 280052 ||||| | || || || | ||||||| ||| | || || | ||| | | | Sbjct 1538734 GGTGAGG--TCAGTTTAACATCAACTATTGTTGGTTTGGCACAGAACTTTGTTGGAAGTA 1538791 Query 280053 ACAACTTAAATCTGCTTTCACCAAATGGTCAATTTGGTTCTCGTAT 280098 |||| | || || | ||||||||||||||| ||| ||||||| Sbjct 1538792 ACAATATCAACTTGTTGGAACCAAATGGTCAATTCGGTACTCGTAT 1538837 >seq13 Length=1031976 Score = 95.1 bits (104), Expect = 3e-14 Identities = 99/130 (76%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 131878 TGTTGAAGGTATATTCTTTTCAGGTGCTTTCTGTGCTATCTTTTGGCTTAAGAAGCGTGG 131937 ||| |||||||| ||||||||||| ||||| | | ||||| ||||| ||||| ||||| Sbjct 741987 TGTCGAAGGTATCTTCTTTTCAGGATCTTTCGCTTCCATCTTCTGGCTCAAGAAACGTGG 742046 Query 131938 ATTGATGCCTGGACTCTCATTGTCCAATCAATTCATCTCGAGAGATGAAGCATTGCATAC 131997 |||||||| ||| | | || ||||| || ||||||| | ||||||| | || || Sbjct 742047 TTTGATGCCAGGATTGACTTTCTCCAACGAACTCATCTCCCGTGATGAAGGTCTTCACAC 742106 Query 131998 TGAATTTGCT 132007 ||| || ||| Sbjct 742107 TGATTTCGCT 742116 >seq5 Length=1604251 Score = 84.2 bits (92), Expect = 5e-11 Identities = 91/121 (75%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 131865 TAGCTTTTGCTTGTGTTGAAGGTATATTCTTTTCAGGTGCTTTCTGTGCTATCTTTTGGC 131924 ||||||| || ||| ||||| || |||||||||||| ||||| |||||||||||| Sbjct 1486661 TAGCTTTCGCAGCTGTCGAAGGGATCTTCTTTTCAGGTTCTTTCGCAGCTATCTTTTGGT 1486602 Query 131925 TTAAGAAGCGTGGATTGATGCCTGGACTCTCATTGTCCAATCAATTCATCTCGAGAGATG 131984 | |||||| | || ||||||||||| | | || || || | || ||| ||||||| Sbjct 1486601 TGAAGAAGAGAGGTTTGATGCCTGGTTTAACGTTTTCGAACGAGTTGATCAGTAGAGATG 1486542 Query 131985 A 131985 | Sbjct 1486541 A 1486541 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186812343818830