Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeotremella_20fagi_20[genbank_20GCA_5F001599715.1_202016-03-01] 30 sequences; 22,649,946 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq13 134 9e-27 seq1 98.7 7e-16 >seq13 Length=1031976 Score = 134 bits (148), Expect = 9e-27 Identities = 158/211 (75%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 33541 ACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCC 33600 ||||| || || ||| |||||||| |||||||||||||||||||| || | || || Sbjct 993172 ACCAAGTGGAGGGTGGATTCTTTTTGAATGTTGTAATCGGAGAGTGTACGACCATCCTCT 993113 Query 33601 AATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCA 33660 |||||||| || || |||||||||||||| || ||| | || | ||||| ||||| Sbjct 993112 AATTGTTTACCAGCGAAAATCAAACGCTGTTGGTCTGGTGGAATTCCTTCCTTGTCTTGG 993053 Query 33661 ATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTT 33719 || || | || ||| | || | |||||| ||||| || |||| ||||| ||||| Sbjct 993052 ATCTT-GGATTTAACGTTATCAATGGTGTCTGAAGATTCGACTTCAAGGGTGATAGTTTT 992994 Query 33720 ACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 ||| || | ||||| |||||||| |||||| Sbjct 992993 ACCAGTAAGAGTTTTAACAAAGATTTGCATA 992963 Score = 102 bits (112), Expect = 5e-17 Identities = 162/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 ||||||||| | ||| | |||||||| ||||| || ||||| ||||||||||| || Sbjct 993647 ACCACCTCTGAGACGAAGGACCAAATGAAGAGTTGATTCCTTTTGGATGTTGTAATCCGA 993588 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 | || | | || ||||||||||| || || || ||||| | ||| || ||| | || Sbjct 993587 TAAAGTTCTACCATCTTCCAATTGTTTACCAGCGAAGATCAATCTCTGTTGGTCTGGTGG 993528 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||| |||||||| |||||| | | |||| ||| | || || |||||| | Sbjct 993527 GATACCCTCTTTGTCTTGAATTTT-AGACTTGACATTGTCGATAGTATCAGATGATTCAA 993469 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | ||||| || || || || | ||||| || || || |||||| Sbjct 993468 CTTCGAGGGTGATAGTCTTTCCGGTGAGGGTTTTGACGAAAATTTGCATA 993419 >seq1 Length=2409791 Score = 98.7 bits (108), Expect = 7e-16 Identities = 135/186 (73%), Gaps = 2/186 (1%) Strand=Plus/Plus Query 33541 ACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCC 33600 |||||||| || || || ||||| ||||||||||| || || || | |||| ||| Sbjct 586122 ACCAAATGAAGGGTAGATTCCTTTTGGATGTTGTAATCTGAAAGAGTTCTACCGTCTTCC 586181 Query 33601 AATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCA 33660 |||||||| || || || |||||||| || || ||| | || | ||||||||| || Sbjct 586182 AATTGTTTACCAGCGAAGATCAAACGTTGTTGGTCTGGTGGGATACCTTCTTTATCTTGG 586241 Query 33661 ATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTT 33719 ||||| | || ||| | || | ||||||| ||| || || || | ||||| ||||| Sbjct 586242 ATTTT-GGATTTAACGTTATCGATGGTGTCGGATGACTCAACCTCGAGGGTGATGGTTTT 586300 Query 33720 ACCTGT 33725 ||| || Sbjct 586301 ACCCGT 586306 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328703879817600