Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeotremella_20fagi_20[genbank_20GCA_5F001599715.1_202016-03-01] 30 sequences; 22,649,946 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq13 118 3e-21 seq8 105 2e-17 >seq13 Length=1031976 Score = 118 bits (130), Expect = 3e-21 Identities = 143/192 (74%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 206191 CTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGA-ATCAGTAAA 206249 || || || ||||| ||||| | ||||| ||| ||||| || |||| | | |||| Sbjct 993724 CTTACCGGTAAAACCATCACCCTCGAAGTCGAATCCTCTGATACTATCGATAACGTTAAA 993783 Query 206250 GCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGG 206309 | ||| || ||||| |||||||| || || ||| |||||||| ||||| ||||| Sbjct 993784 TCCAAA-ATCCAAGATAAAGAAGGTATCCCCCCAGACCAACAAAGACTCATCTTTGCCGG 993842 Query 206310 AAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCT 206369 || |||||||||||||| || || ||| | |||||||| |||| || |||||||| || Sbjct 993843 TAAACAGTTGGAAGATGGTAGAACCTTGTCTGATTACAATATCCAAAAGGAGTCTACACT 993902 Query 206370 TCACCTTGTTTT 206381 ||| | ||||| Sbjct 993903 TCATTTGGTTTT 993914 Score = 111 bits (122), Expect = 4e-19 Identities = 138/189 (73%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243 |||||| ||||| ||||| || ||||| | ||||| ||| ||||| || |||| Sbjct 993434 CAAAACCCTCACCGGAAAGACTATCACCCTCGAAGTTGAATCATCTGATACTATCGACAA 993493 Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||| || |||||||| ||||| || || || ||| || ||| | ||||| Sbjct 993494 TGTCAAGTCTAAAATTCAAGACAAAGAGGGTATCCCACCAGACCAACAGAGATTGATCTT 993553 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 ||| || || || ||||||||||| || ||||| | ||||||||| |||| || || || Sbjct 993554 CGCTGGTAAACAATTGGAAGATGGTAGAACTTTATCGGATTACAACATCCAAAAGGAATC 993613 Query 206364 TACTCTTCA 206372 |||||||| Sbjct 993614 AACTCTTCA 993622 Score = 84.2 bits (92), Expect = 5e-11 Identities = 142/203 (70%), Gaps = 2/203 (1%) Strand=Plus/Plus Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGA-AT 206242 |||||| || || || ||||| |||||||||||||| ||| || ||||| |||| | Sbjct 993206 CAAAACTCTTACTGGTAAAACCATCACTTTGGAAGTTGAATCATCCGACACCATCGACAA 993265 Query 206243 CAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCT 206302 | |||| | ||||| ||||| ||||| || || || || |||||| | || | Sbjct 993266 CGTTAAATC-CAAGATCCAAGACAAAGAGGGTATCCCACCAGATCAACAAAGATTGATTT 993324 Query 206303 TCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGT 206362 ||||||| || || || || || || | || | | || |||||| | || ||||| | Sbjct 993325 TCGCCGGTAAACAATTAGAGGACGGTCGTACACTCTCAGACTACAACATTCAAAAAGAAT 993384 Query 206363 CTACTCTTCACCTTGTTTTGAGA 206385 | || ||||| | ||| | ||| Sbjct 993385 CAACCCTTCATTTGGTTCTTAGA 993407 >seq8 Length=1407489 Score = 105 bits (116), Expect = 2e-17 Identities = 172/248 (69%), Gaps = 0/248 (0%) Strand=Plus/Plus Query 173107 GCGTCCTTGTAGACGATGAAGGGCATACCAACCTCCGCTTGAGCCACCAAAATGTGGTGC 173166 ||||||||||| | |||||||| | ||| ||| | |||||| | | ||| | | Sbjct 619924 GCGTCCTTGTAAAGCATGAAGGGGTTGCCAGTCTCGGTTTGAGCTTCGAGAATAGCGAAC 619983 Query 173167 CAAAGTTCTTGGGCTTTTACGGTAGTTCTCGCTCTTCCTTCTTTTTCGTATCTCTCATAG 173226 ||||||| ||| ||||| | ||| |||| || | || |||| |||||| || || Sbjct 619984 CAAAGTTTTTGAGCTTTGATGGTCTTTCTACCTTTACCAGCTTTCTCGTATGATTCGTAA 620043 Query 173227 AGGTCTTCGAAATCCTTCCCGTAAATTTCGTCAAGACCGGGAGCTTCCTTCGGACAAAAG 173286 || || |||| | | || || ||| ||||||| ||| ||| ||||| | | Sbjct 620044 AGCTCGACGAACTTTTCAGAGTGAACATCGGCAAGACCTGGACATTCAGCTGGACACATG 620103 Query 173287 AGACTCCAATTTCCATCGGTCTCGACCCTCTTCATGAAGAGGTCGGAAGTCCAAATCGCG 173346 || |||||| |||||||| ||||| | ||||||||| || || | |||| | ||| Sbjct 620104 AGGGTCCAATCTCCATCGGCTTCGACACGCTTCATGAAAAGATCAGGGATCCAGAGAGCG 620163 Query 173347 TAGAACAA 173354 |||||||| Sbjct 620164 TAGAACAA 620171 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181820345737630