Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeotremella_20fagi_20[genbank_20GCA_5F001599715.1_202016-03-01] 30 sequences; 22,649,946 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq13 98.7 9e-16 seq1 82.4 7e-11 >seq13 Length=1031976 Score = 98.7 bits (108), Expect = 9e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 ||||||||||| || | ||||| || | || || ||||||||||||||||||| Sbjct 993190 CCACCACGTAATCTGAGAACCAAGTGGAGGGTGGATTCTTTTTGAATGTTGTAATCGGAG 993131 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | || || | || || | || ||||| || || ||||| ||||| ||||| | ||| Sbjct 993130 AGTGTACGACCATCCTCTAATTGTTTACCAGCGAAAATCAAACGCTGTTGGTCTGGTGGA 993071 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT-GCCACCGTGTCGCTCGATTCCAC 35688 | | |||||||| |||| || | || | ||| | | ||||| ||||| || Sbjct 993070 ATTCCTTCCTTGTCTTGGATC-TTGGATTTAACGTTATCAATGGTGTCTGAAGATTCGAC 993012 Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || | ||||| |||||||| || | |||||| ||||| || ||||| Sbjct 993011 TTCAAGGGTGATAGTTTTACCAGTAAGAGTTTTAACAAAGATTTGCAT 992964 Score = 89.7 bits (98), Expect = 5e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 ||||||||||| || | |||||||| | || || |||||||||||||| || | Sbjct 993418 CCACCACGTAATCTAAGAACCAAATGAAGGGTTGATTCTTTTTGAATGTTGTAGTCTGAG 993359 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | || || |||| || | || ||||| || || ||||| | || || || | || Sbjct 993358 AGTGTACGACCGTCCTCTAATTGTTTACCGGCGAAAATCAATCTTTGTTGATCTGGTGGG 993299 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCAC 35688 | | ||| ||||| |||| || | || | |||| | | |||||| ||||| || Sbjct 993298 ATACCCTCTTTGTCTTGGATC-TTGGATTTAACGTTGTCGATGGTGTCGGATGATTCAAC 993240 Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 |||| ||||| |||||||| || | |||||| || || || ||||| Sbjct 993239 TTCCAAAGTGATGGTTTTACCAGTAAGAGTTTTGACGAAGATTTGCAT 993192 >seq1 Length=2409791 Score = 82.4 bits (90), Expect = 7e-11 Identities = 142/204 (70%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 ||||||||||| || | |||||||| | ||| |||||||| ||||||||||| | Sbjct 586104 CCACCACGTAATCTAAGAACCAAATGAAGGGTAGATTCCTTTTGGATGTTGTAATCTGAA 586163 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | |||| |||| |||| || ||||| || || ||||| || || ||||| | || Sbjct 586164 AGAGTTCTACCGTCTTCCAATTGTTTACCAGCGAAGATCAAACGTTGTTGGTCTGGTGGG 586223 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT-GCCACCGTGTCGCTCGATTCCAC 35688 | | || || || ||| ||| | || | ||| | | |||||| || || || Sbjct 586224 ATACCTTCTTTATCTTGGAT-TTTGGATTTAACGTTATCGATGGTGTCGGATGACTCAAC 586282 Query 35689 CTCCACCGTGATCGTTTTACCCGT 35712 ||| | ||||| ||||||||||| Sbjct 586283 CTCGAGGGTGATGGTTTTACCCGT 586306 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450793430952400