Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeotremella_20fagi_20[genbank_20GCA_5F001599715.1_202016-03-01] 30 sequences; 22,649,946 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq13 123 3e-23 seq1 98.7 1e-15 seq2 86.0 6e-12 >seq13 Length=1031976 Score = 123 bits (136), Expect = 3e-23 Identities = 149/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 134511 TGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGT 134570 || || || ||||| ||||||||||||||||| | || || ||| || | ||| Sbjct 993394 TGAAGGGTTGATTCTTTTTGAATGTTGTAGTCTGAGAGTGTACGACCGTCCTCTAATTGT 993335 Query 134571 TTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTT 134630 || || || |||||||| | || ||||| || || || || ||||| ||||| || || Sbjct 993334 TTACCGGCGAAAATCAATCTTTGTTGATCTGGTGGGATACCCTCTTTGTCTTGGATCTTG 993275 Query 134631 TGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTT 134690 ||| || ||| | |||||||| ||||| || || | ||| ||||||||||| || Sbjct 993274 GATTTAACGTTGTCGATGGTGTCGGATGATTCAACTTCCAAAGTGATGGTTTTACCAGTA 993215 Query 134691 AAAGTTTTAACGAAAATTTGCAT 134713 | |||||| ||||| |||||||| Sbjct 993214 AGAGTTTTGACGAAGATTTGCAT 993192 Score = 120 bits (132), Expect = 3e-22 Identities = 149/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 134510 GTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTG 134569 ||| || |||||||| |||||||||||||| ||| | || || || || | || Sbjct 993167 GTGGAGGGTGGATTCTTTTTGAATGTTGTAATCGGAGAGTGTACGACCATCCTCTAATTG 993108 Query 134570 TTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTT 134629 ||| || || |||||||||||||| || || || || || ||||| || ||||| || || Sbjct 993107 TTTACCAGCGAAAATCAAACGCTGTTGGTCTGGTGGAATTCCTTCCTTGTCTTGGATCTT 993048 Query 134630 TTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGT 134689 ||| || || | ||||| || ||||| || || || || || |||||||| || Sbjct 993047 GGATTTAACGTTATCAATGGTGTCTGAAGATTCGACTTCAAGGGTGATAGTTTTACCAGT 992988 Query 134690 TAAAGTTTTAACGAAAATTTGCAT 134713 | ||||||||| || |||||||| Sbjct 992987 AAGAGTTTTAACAAAGATTTGCAT 992964 Score = 111 bits (122), Expect = 2e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545 || |||||||| || | || | || || || ||||||||||| |||||||| || | Sbjct 993646 CCACCTCTGAGACGAAGGACCAAATGAAGAGTTGATTCCTTTTGGATGTTGTAATCCGAT 993587 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 || | | | | || || | ||||| || || || ||||| | ||| || || || || Sbjct 993586 AAAGTTCTACCA-TCTTCCAATTGTTTACCAGCGAAGATCAATCTCTGTTGGTCTGGTGG 993528 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 || || ||||| ||||||||||| ||||| ||| | || || || ||||| || Sbjct 993527 GATACCCTCTTTGTCTTGAATTTTAGACTTGACATTGTCGATAGTATCAGATGATTCAAC 993468 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| || || || || ||||| | ||||| |||||||||||||| Sbjct 993467 TTCGAGGGTGATAGTCTTTCCGGTGAGGGTTTTGACGAAAATTTGCAT 993420 Score = 95.1 bits (104), Expect = 1e-14 Identities = 94/122 (77%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 134568 TGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATT 134627 ||||| || ||||| |||||||| || ||||| || || || ||||| || |||||||| Sbjct 992506 TGTTTACCAGCAAAGATCAAACGTTGTTGATCAGGTGGGATACCTTCCTTGTCTTGAATC 992447 Query 134628 TTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCG 134687 || |||||| ||| | ||||| || ||||| || ||||| || ||||||||||| Sbjct 992446 TTGGATTTGACATTGTCAATGGTGTCAGAGGATTCAACCTCGAGTGTGATGGTTTTACCC 992387 Query 134688 GT 134689 || Sbjct 992386 GT 992385 Score = 86.0 bits (94), Expect = 6e-12 Identities = 98/132 (74%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 134558 GTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTT 134617 ||| ||||| ||||| || || ||||||||||| || || || || || || |||||||| Sbjct 992841 GTCTTCGAGTTGTTTACCGGCGAAAATCAAACGTTGTTGGTCTGGTGGGATTCCTTCTTT 992782 Query 134618 TTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAAT 134677 ||||| || || ||||| ||| | ||||| || || || || || || || || Sbjct 992781 GTCTTGGATCTTAGACTTGACGTTGTCAATGGTGTCTGAAGACTCGACCTCAAGGGTGAT 992722 Query 134678 GGTTTTACCGGT 134689 ||||||||| || Sbjct 992721 GGTTTTACCAGT 992710 >seq1 Length=2409791 Score = 98.7 bits (108), Expect = 1e-15 Identities = 129/179 (72%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 134511 TGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGT 134570 || || || ||||||||||| |||||||| || || || | ||| || | ||| Sbjct 586128 TGAAGGGTAGATTCCTTTTGGATGTTGTAATCTGAAAGAGTTCTACCGTCTTCCAATTGT 586187 Query 134571 TTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTT 134630 || || || || |||||||| || || || || || || |||||||| ||||| ||||| Sbjct 586188 TTACCAGCGAAGATCAAACGTTGTTGGTCTGGTGGGATACCTTCTTTATCTTGGATTTTG 586247 Query 134631 TGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGT 134689 ||| || || | |||||||| || || || ||||| || ||||||||||| || Sbjct 586248 GATTTAACGTTATCGATGGTGTCGGATGACTCAACCTCGAGGGTGATGGTTTTACCCGT 586306 >seq2 Length=2299803 Score = 86.0 bits (94), Expect = 6e-12 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 134568 TGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATT 134627 ||||| || || ||||| || || || || || || || || |||||||| ||||| || Sbjct 838559 TGTTTACCAGCGAAAATTAATCGTTGTTGGTCTGGTGGGATTCCTTCTTTATCTTGGATC 838618 Query 134628 TTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCG 134687 || |||||| ||| | |||||||| ||||| || |||||||||||||| || || Sbjct 838619 TTGGATTTGACGTTGTCGATGGTGTCGGATGATTCGACCTCGAGAGTAATGGTCTTTCCC 838678 Query 134688 GT 134689 || Sbjct 838679 GT 838680 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505398210475600