Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeotremella_20fagi_20[genbank_20GCA_5F001599715.1_202016-03-01] 30 sequences; 22,649,946 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq8 150 2e-31 seq5 104 3e-17 seq13 100 4e-16 >seq8 Length=1407489 Score = 150 bits (166), Expect = 2e-31 Identities = 439/675 (65%), Gaps = 6/675 (1%) Strand=Plus/Plus Query 69268 AGTGCTACAGATGCTAGATTACAAACTGCTACCTCATTAGAATTTGCATATTGTATTATC 69327 || || | ||| || ||||||||||| || || |||| | | |||| || || Sbjct 619801 AGAGCAAGAGAGGCGAGATTACAAACAGCGACTTCATCTGGGGCAGAGTATTCGATGATT 619860 Query 69328 TCTGTACATAGATTACTACATTTGATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTA 69387 || ||||| | ||||| | ||||| || || |||| ||| || || || ||| Sbjct 619861 TCAGTACACAAGTTACTTGACTTGATTGTACCAAGATGTTGGTGGTTGGATTTGGAGTTG 619920 Query 69388 CAGGCGTCCTTGTAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCGATAATAGAT 69447 |||||||||||||| || || || | ||||| || | |||| ||||| ||||| Sbjct 619921 GCAGCGTCCTTGTAAAGCATGAAGGGGTTGCCAGTCTCGGTTTGAGCTTCGAGAATAGCG 619980 Query 69448 TTCCAAACGACCCTAGCATTTATTACGGTCTTGTAACGCTTCTC---TTTTTCATATTGT 69504 ||||| ||| || || |||||| || || | ||| || ||| | Sbjct 619981 AACCAAAGTTTTTGAGCTTTGAT---GGTCTTTCTACCTTTACCAGCTTTCTCGTATGAT 620037 Query 69505 GTATATAGCCGTTCGAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGA 69564 || ||| |||| | || |||||| | | || ||||||||| |||| Sbjct 620038 TCGTAAAGCTCGACGAACTTTTCAGAGTGAACATCGGCAAGACCTGGACATTCAGCTGGA 620097 Query 69565 CACATCAATGACCACACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAA 69624 ||||| | | ||| | |||| | | || || ||||| || ||||| || ||||| Sbjct 620098 CACATGAGGGTCCAATCTCCATCGGCTTCGACACGCTTCATGAAAAGATCAGGGATCCAG 620157 Query 69625 AGAGCTATAAAGAGATCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCG 69684 ||||| || | ||| | | || | |||||| || || |||||| |||||| Sbjct 620158 AGAGCGTAGAACAAATCACGAGCTCGAACTTCTTCTTTACCGTGATTTTTACGGAGATCG 620217 Query 69685 AGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGT 69744 || || || | || ||| | ||||||||||| || || || || | | || |||| Sbjct 620218 AGGAAATCGAAAACATCGGCGTGCCATGGTTCGAGGTAGATAGCGAAAGCACCTGGTCTC 620277 Query 69745 TTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATA 69804 || || || || || || | ||||||||| || | | |||| ||||| |||| Sbjct 620278 TTGTTACCACCTTGGTCGACGTATCTGGCGGTAGCGTCGAAAGCTCTAAGCATTGGAACG 620337 Query 69805 ATACCATTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTA 69864 ||||| ||||| | ||| || || || | ||| || ||| | || || || || Sbjct 620338 ATACCGTTAGAGTAACCGTTGGTACCGGCAATGTATGAACCTTTAGCACGGATGTTGTGG 620397 Query 69865 ATAGATAGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCA 69924 || ||||| || || || || ||||||||||| |||||||| ||||| ||||| Sbjct 620398 ATGTGGAGACCGATACCACCAGCAGTTTTAGAGATTTGAGCACAAATCTTCAAAGTGTCG 620457 Query 69925 TATATACCCTCTATG 69939 || ||||| || ||| Sbjct 620458 TAGATACCGTCAATG 620472 Score = 105 bits (116), Expect = 9e-18 Identities = 192/279 (69%), Gaps = 3/279 (1%) Strand=Plus/Plus Query 68397 GGGTTTTGTACGTAGATAGTACATACCGGTTTTCAGACCTAGACTCCATCCGTAGAAATG 68456 ||||||||| | || ||||| |||||| |||| ||| |||| |||||||| || Sbjct 618875 GGGTTTTGTTCTAAGGTAGTAACAACCGGTCTTCAATCCTCTCTTCCAACCGTAGAAGTG 618934 Query 68457 CATACTTGTTAGTTTGGAATAACTTGGATCGGCTATATGAATATTCATCGATTGACTTTG 68516 ||| |||| || || || ||| | ||| | ||| || || | |||||| ||| Sbjct 618935 CATGGACGTTAATTGTGAGAAAGATGGGTTGGCAAGATGGATGTTGAGGGATTGAGATTG 618994 Query 68517 ATCGATGAAAGCTCCTCTATCTGCCGCCATTTTTATAATACTCTTTTGAGGAATTTCCCA 68576 ||| | ||||||||| | ||| || || | | || | | ||||||| ||||||||| Sbjct 618995 ATCAAGGAAAGCTCCACGATCAGCGGCAAGATCAATGACAGCTTTTTGAGAAATTTCCCA 619054 Query 68577 AATAGTCTTAAAAATCTGTTTGATATCATCTGGAA-GGCTCG--TATTTTGAATGGATCC 68633 || |||||| | || ||| | ||| |||||| || | | | ||||||||||| || Sbjct 619055 AACAGTCTTGTAGATAGCTTTCAAATCGGCTGGAATGGATGGAATGTTTTGAATGGAACC 619114 Query 68634 ACCATCGGATATAATTATATTCTTGATCTCATCATTCCA 68672 ||| | | || || | ||||| || | |||| ||| Sbjct 619115 ACCGGCAGCAATGATGAGGTTCTTCATGTTGTCATCCCA 619153 >seq5 Length=1604251 Score = 104 bits (114), Expect = 3e-17 Identities = 96/122 (79%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 39638 CCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTT 39697 |||||||||||||| || || ||||| ||||| || | |||||||| | ||| | ||| Sbjct 1486538 CCCTCATCTCTACTGATCAACTCGTTCGAAAACGTTAAACCAGGCATCAAACCTCTCTTC 1486597 Query 39698 TTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAAT 39757 || | |||||| || || || ||||| || ||||||||||| ||||| || ||||| || Sbjct 1486598 TTCAACCAAAAGATAGCTGCGAAAGAACCTGAAAAGAAGATCCCTTCGACAGCTGCGAAA 1486657 Query 39758 GC 39759 || Sbjct 1486658 GC 1486659 >seq13 Length=1031976 Score = 100 bits (110), Expect = 4e-16 Identities = 152/213 (71%), Gaps = 5/213 (2%) Strand=Plus/Minus Query 39614 AAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTG 39673 || || ||||| ||| || || || ||||| | || | |||||| || || || Sbjct 742121 AAACAAGCGAAATCAGTGTGAAGACCTTCATCACGGGAGATGAGTTCGTTGGAGAAAGTC 742062 Query 39674 AGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAG 39733 | ||| ||||| | |||||| || |||||||| || |||| ||| |||||||| |||||| Sbjct 742061 AATCCTGGCATCAAACCACGTTTCTTGAGCCAGAAGATGGAAGCGAAAGATCCTGAAAAG 742002 Query 39734 AAGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCAT---TA 39790 ||||| ||||| || || || || || | | |||||| || | ||| ||| | | Sbjct 742001 AAGATACCTTCGACAGCGGCGAAGGCGATCAATCTCTCGGCGAATGTTG-ATCGTTCGTC 741943 Query 39791 TG-TATCCACTTCTGTGCCCAATCAGCTTTCTT 39822 || ||||| || | ||||||||||| || || Sbjct 741942 TGAGATCCATTTGAGAGCCCAATCAGCCTTTTT 741910 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686908542409200