Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeotremella_20fagi_20[genbank_20GCA_5F001599715.1_202016-03-01] 30 sequences; 22,649,946 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq2 102 1e-16 >seq2 Length=2299803 Score = 102 bits (112), Expect = 1e-16 Identities = 243/356 (68%), Gaps = 21/356 (6%) Strand=Plus/Minus Query 182513 GATGAG---ACCCTTGATGTGAGAACCATCATTATCGGCATCTGTCATAATCATAAGACG 182569 |||||| ||||||||| || |||||||||| ||| ||||||||| ||||| | | | Sbjct 1538048 GATGAGCAAACCCTTGATATGGGAACCATCATGATCTTGATCTGTCATGATCATCAAATG 1537989 Query 182570 ACCATAGCG--AAGT-TCAGAAACATCTTGGT--AGTCTTTTCCTTGTTGAAGACCAAGG 182624 |||||| || || | |||| | |||| | ||| |||| | || | Sbjct 1537988 ACCATAACGTAAACTATCAG-----TGGTGGTGTAAACTTGATTATGTTTCAATCCTAAA 1537934 Query 182625 ATCTTCTTGAGATCATTGAA-CTCCTGGTTTGATGTAAGCTGTGCCACCGAAGCGTCCCG 182683 |||| |||| || ||||| ||| |||| || | ||| | ||| || || Sbjct 1537933 ATCTGTTTGATATG-TTGAATCTCGACGTTTTTGGTGATCTGATCGTGTCCAGCTTCACG 1537875 Query 182684 AACATTCTTACATTTACCGCGAAGTGGGAACACACCGTA-GTGATCACGACCAACGACAG 182742 || || ||||||| ||||||||||| |||||||| ||| |||||||| || || | Sbjct 1537874 GACGTTTAGCAATTTACCACGAAGTGGGAAAACACCGTATGTG-TCACGACCGACAACTG 1537816 Query 182743 AGAGACCCGCAACCGCGAGGGTTTTCGCCGAATCACCCTCCGTGACAATGAGAGTACACT 182802 | | ||| | || ||||| | || || ||||| || || || | |||||| ||||| | Sbjct 1537815 ATAAACCGGATACAGCGAGCGCCTTGGCTGAATCTCCTTCTGTAAGAATGAGGGTACAGT 1537756 Query 182803 TTCCAG--ATTGTGCCGTACCCGCCTTGTTCGCGTCATCCAACTTGGGAATACCGG 182856 || || || |||| ||| || ||||| || || ||||||||| ||||||| Sbjct 1537755 TTTTAGCATTTCTGCC--ACCGGCGTTGTTGGCATCTTCCAACTTGACGATACCGG 1537702 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628031764488000