Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeotremella_20fagi_20[genbank_20GCA_5F001599715.1_202016-03-01] 30 sequences; 22,649,946 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq8 147 3e-30 seq13 98.7 1e-15 >seq8 Length=1407489 Score = 147 bits (162), Expect = 3e-30 Identities = 539/829 (65%), Gaps = 25/829 (3%) Strand=Plus/Plus Query 118629 TTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAA-ACTGCGAGTCTC 118687 || ||||| || ||||| |||||||| ||||| || | | ||||| | ||| | |||| Sbjct 619723 TTCTTGGTAACGACCTTGGTGATTTCGTGAAGTTTCTTGAAATCATACACT-CTCTTCTC 619781 Query 118688 TTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTT 118747 | |||| | ||| || || | || || |||||||| |||| | ||||| Sbjct 619782 CATGTCGACAAAGGCAGGGAGAGCAAGAGAGGCGAGATTACAAACAGCGACTTCATCTGG 619841 Query 118748 ATCAGTGTACTCTATAATTTCCGTGCACAAGTTTGAACT---CTTAATGGTGCCCAAGTT 118804 ||| ||| || || ||||| || |||||||| ||| ||| || || || ||| | Sbjct 619842 GGCAGAGTATTCGATGATTTCAGTACACAAGTT---ACTTGACTTGATTGTACC-AAGAT 619897 Query 118805 CTTT-TGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCT 118863 || || || || || | ||| || ||||||||||||||| | || | || |||| Sbjct 619898 GTTGGTGGTTGGATTTGGAGTTGGCAGCGTCCTTGTAAAGCATGAAGGGGTTGCCAGTCT 619957 Query 118864 CCGTTTGGGACTTGAGAATAGCCTTCCAGACATCGGCAGCTGGCACAGTGGCGTTGGCTC 118923 | ||||| | | ||||||||| ||| | | |||| | || | || Sbjct 619958 CGGTTTGAGCTTCGAGAATAGCGAACCAAAGTTTTTGAGCTTTGATGGTCTTTCTACCTT 620017 Query 118924 GCCCCTCTTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGA 118983 || ||| |||||| | ||| || | | |||| |||| | || | | Sbjct 620018 TACCAGCTTTCTCGTATGATTCGTAAAGCTCGACGAACTTTTCAGAGTGAACATCGGCAA 620077 Query 118984 GCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCA 119043 | ||||| | | |||| || | ||| | ||| | ||| | | || || ||||||| Sbjct 620078 GACCTGGACATTCAGCTGGACACATGAGGGTCCAATCTCCATCGGCTTCGACACGCTTCA 620137 Query 119044 TGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCC 119103 |||| || || ||||||||||| || |||| | ||| ||| ||| ||||||| | | Sbjct 620138 TGAAAAGATCAGGGATCCAGAGAGCGTAGAACAAATCACGAGCTCGAACTTCTTCTTTAC 620197 Query 119104 CCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACA 119163 | ||||| ||| | || | || || | | ||| |||||||| ||||| ||||| | Sbjct 620198 CGTGATTTTTACGGAGATCGAGGAAATCGAAAACATCGGCGTGCCATGGTTCGAGGTAGA 620257 Query 119164 CCGCGATTG-ACCCCTTACGACG--ACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAA 119220 |||| | ||| | | |||| | |||| || || || || || |||| | Sbjct 620258 TAGCGAAAGCACCTGGTCTCTTGTTACCACCTTGGTCGACGTATCTGGCGGTAGCGTCGA 620317 Query 119221 ATACACGAAGCATTGGAATGATACCATCGGATTGGCCATTTGTCCCCCGAA--TACGAGA 119278 | | | ||||||||||| |||||| | || | || || || || || || || Sbjct 620318 AAGCTCTAAGCATTGGAACGATACCGTTAGAGTAACCGTTGGTACCGGCAATGTATGAAC 620377 Query 119279 CTTATTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTG 119338 || || || | || | ||||||||| | ||| ||||| || || || |||||||| Sbjct 620378 CT--TTAGCACGGATGTTGTGGATGTGGAGACCGATACCACCAGCAGTTTTAGAGATTTG 620435 Query 119339 CGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTC---ACCCTTATTTGCGAT 119395 || || | | | | || ||||||| || || || || || | || | || | Sbjct 620436 AGCACAAATCTTCAAAGTGTCGTAGATACCGTCAATGGAATCTGAAGCC---ATGGCAAC 620492 Query 119396 GAGGAAGCAGCTCGACATTTGAGGCCTG-GGTGTACCAGCGTTGAAGAG 119443 |||||| || |||||||||| || || |||||||| |||||||| || Sbjct 620493 GAGGAAACATGACGACATTTGA-GCGTGAGGTGTACCGGCGTTGAAAAG 620540 >seq13 Length=1031976 Score = 98.7 bits (108), Expect = 1e-15 Identities = 164/235 (70%), Gaps = 8/235 (3%) Strand=Plus/Minus Query 130027 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACC 130086 ||| ||||| || ||||||||||||||||| || ||||| || |||||||| | ||| Sbjct 742104 GTGAAGACCTTCATCACGGGAGATGAGTTCGTTGGAGAAAGTCAATCCTGGCATCAAACC 742045 Query 130087 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACA 130146 || ||||| | |||||| || | | || || || || |||||||| || || ||| Sbjct 742044 ACGTTTCTTGAGCCAGAAGATGGAAGCGAAAGATCCTGAAAAGAAGATACCTTCGACAGC 741985 Query 130147 CGCGAACGCAAAGAGACGCTCAGCAAA---GGAGCGGGACTTTGTATCA-AACCACTTCA 130202 ||||| || | | | ||| || || || || || || | | | ||| || | Sbjct 741984 GGCGAAGGCGATCAATCTCTCGGCGAATGTTGATCG----TTCGTCTGAGATCCATTTGA 741929 Query 130203 TCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAG 130257 ||||| | |||||||| ||||||| |||| ||| | ||| ||||| || || Sbjct 741928 GAGCCCAATCAGCCTTTTTGGCGATACATGGGATGGTGTCGATGGCTTCGAAAAG 741874 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618434968086800