Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeotremella_20fagi_20[genbank_20GCA_5F001599715.1_202016-03-01] 30 sequences; 22,649,946 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq8 109 6e-19 seq13 84.2 3e-11 >seq8 Length=1407489 Score = 109 bits (120), Expect = 6e-19 Identities = 474/747 (63%), Gaps = 11/747 (1%) Strand=Plus/Minus Query 104336 CTCTTCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAG 104395 || ||||| || |||||||| | |||||||| || ||||| | |||| Sbjct 620540 CTTTTCAACGCCGGTACACCTCACGCTCAAATGTCGTCATGTTTCCTCGTTGCCATGGCT 620481 Query 104396 GAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGG 104455 || || || |||||||||| | ||| | | | ||||| |||||||| || Sbjct 620480 TCAGATTCCATTGACGGTATCTACGACACTTTGAAGATTTGTGCTCAAATCTCTAAAACT 620421 Query 104456 GCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGG 104515 ||||| ||||| || | |||||||| | | | || || || ||| || Sbjct 620420 GCTGGTGGTATCGGTCTCCACATCCACAACATCCGTGCTAAAGGTTCATACATTGCCGGT 620361 Query 104516 ACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGC 104575 || || ||| | || | ||||| ||||||||||| | | || |||| || || | Sbjct 620360 ACCAACGGTTACTCTAACGGTATCGTTCCAATGCTTAGAGCTTTCGACGCTACCGCCAGA 620301 Query 104576 TATGTAAATCAAGCTGGGCGTCGAAAG----GGATCTATCGCAGTCTATCTTGAGCCATG 104631 || || | |||| ||| | | || || || |||| |||| || || ||||| Sbjct 620300 TACGTCGACCAAGGTGGTAA-CAAGAGACCAGGTGCTTTCGCTATCTACCTCGAACCATG 620242 Query 104632 GCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCG 104691 |||||| ||| | | || ||||| || | ||| || || ||| | || || | || Sbjct 620241 GCACGCCGATGTTTTCGATTTCCTCGATCTCCGTAAAAATCACGGTAAAGAAGAAGTTCG 620182 Query 104692 GTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGA 104751 || ||| | |||| |||||||||||| || ||||| ||||||||| | || || | Sbjct 620181 AGCTCGTGATTTGTTCTACGCTCTCTGGATCCCTGATCTTTTCATGAAGCGTGTCGAAGC 620122 Query 104752 GAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGG 104811 ||| ||||| | ||| | ||||||| | || ||||| |||||| Sbjct 620121 CGATGGAGATTGGACCCTCATGTGTCCAGCTGAATGTCCAGGTCTTGCCGATGTTCACTC 620062 Query 104812 TGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACGGT 104871 ||| |||| | | |||||| | |||||| ||| ||| | | ||| | Sbjct 620061 TGAAAAGTTCGTCGAGCTTTACGAATCATACGAGAAAGCTGGTAAAGGTAGAAAGACCAT 620002 Query 104872 GCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATA 104931 |||| | | ||| ||||||||| | |||||||||||||||| | || | Sbjct 620001 CAAAGCTCAAAAACTTTGGTTCGCTATTCTCGAAGCTCAAACCGAGACTGGCAACCCCTT 619942 Query 104932 CATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAA 104991 |||||||||||| ||||| ||| || || || | || | ||| ||||| Sbjct 619941 CATGCTTTACAAGGACGCTGCCAACTCCAAATCCAACCACCAACATCTTGGTACAATCAA 619882 Query 104992 G---AGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGT 105048 | ||| || | ||||| |||||| | |||| | | | |||||| ||||| Sbjct 619881 GTCAAGT---AACTTGTGTACTGAAATCATCGAATACTCTGCCCCAGATGAAGTCGCTGT 619825 Query 105049 GTGTAACCTCGCATCAATCGCTCTCCC 105075 ||||| ||||| || | |||||||| Sbjct 619824 TTGTAATCTCGCCTCTCTTGCTCTCCC 619798 >seq13 Length=1031976 Score = 84.2 bits (92), Expect = 3e-11 Identities = 161/235 (69%), Gaps = 8/235 (3%) Strand=Plus/Plus Query 94714 CTCTTTGAAGCCATCCAAACAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAG 94773 || || ||||||||| | || | || ||||| || || || ||||||||| | || Sbjct 741874 CTTTTCGAAGCCATCGACACCATCCCATGTATCGCCAAAAAGGCTGATTGGGCTCTCAAA 741933 Query 94774 TGGTT-TGATACAAAGTCGCGTTCC---TTTGCTGAGCGACTCTTCGCATTTGCGTGTGT 94829 ||| | | | || || || || || || ||| || | |||| || || ||| Sbjct 741934 TGGATCTCAGACGAA----CGATCAACATTCGCCGAGAGATTGATCGCCTTCGCCGCTGT 741989 Query 94830 TGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCT 94889 || ||||||||||| || || || ||| | || | ||||||||||| || ||| | Sbjct 741990 CGAAGGTATCTTCTTTTCAGGATCTTTCGCTTCCATCTTCTGGCTCAAGAAACGTGGTTT 742049 Query 94890 CATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCAC 94944 |||||||| | ||||||||||| || ||||| ||||| || || || ||| Sbjct 742050 GATGCCAGGATTGACTTTCTCCAACGAACTCATCTCCCGTGATGAAGGTCTTCAC 742104 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583260581277200