Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeotremella_20fagi_20[genbank_20GCA_5F001599715.1_202016-03-01] 30 sequences; 22,649,946 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq8 116 4e-21 seq13 84.2 2e-11 >seq8 Length=1407489 Score = 116 bits (128), Expect = 4e-21 Identities = 312/475 (66%), Gaps = 4/475 (1%) Strand=Plus/Minus Query 19217 CTTTTCAACGCCGGTACGAACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAG 19276 ||||||||||||||||| || | || |||||| |||||||| || || ||| Sbjct 620540 CTTTTCAACGCCGGTACACCTCACGCTCAAATGTCGTCATGTTTCCTCGTTGCCATGGCT 620481 Query 19277 GATGACAGCATTGAGGGCATCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGG 19336 || |||||| || |||||||| || | ||| || || || ||||| || Sbjct 620480 TCAGATTCCATTGACGGTATCTACGACACTTTGAAGATTTGTGCTCAAATCTCTAAAACT 620421 Query 19337 TCCGGGGGTATCGGGATCCACTGCTCGAATATCCGGTCGAGTGGTACACGAATCAATGGG 19396 | || |||||||| ||||| | || ||||| | | ||| || || || Sbjct 620420 GCTGGTGGTATCGGTCTCCACATCCACAACATCCGTGCTAAAGGTTCATACATTGCCGGT 620361 Query 19397 ACGAACGGAGTAGCCGACGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGG 19456 || ||||| | |||||||||| |||||||| | | ||| || || ||||| Sbjct 620360 ACCAACGGTTACTCTAACGGTATCGTTCCAATGCTTAGAGCTTTCGACGCTACCGCCAGA 620301 Query 19457 TACGTCAACCAGGGGGGCGGCAAACG--CAAGGGCTCGTTCGCCATCTACCTCGAGCCAT 19514 |||||| |||| || || ||| | || | ||| ||||| ||||||||||| |||| Sbjct 620300 TACGTCGACCAAGGTGGTAACAAGAGACCAGGTGCT--TTCGCTATCTACCTCGAACCAT 620243 Query 19515 GGCACGCGGACGTCATGGATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGC 19574 ||||||| || || | ||||||||||| || || || || ||| | || || | | Sbjct 620242 GGCACGCCGATGTTTTCGATTTCCTCGATCTCCGTAAAAATCACGGTAAAGAAGAAGTTC 620183 Query 19575 GCTGTCGCGACCTCTTCACGGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGA 19634 | ||| || | ||| || | ||||| || || || |||||| || || || Sbjct 620182 GAGCTCGTGATTTGTTCTACGCTCTCTGGATCCCTGATCTTTTCATGAAGCGTGTCGAAG 620123 Query 19635 AGGACGAAGAATGGCACCTGATGTGCCCGCACGAATGCCCTGGCCTACCCGACGT 19689 || | ||| ||| ||| ||||| || ||||| || || || |||| || Sbjct 620122 CCGATGGAGATTGGACCCTCATGTGTCCAGCTGAATGTCCAGGTCTTGCCGATGT 620068 Score = 96.9 bits (106), Expect = 4e-15 Identities = 266/408 (65%), Gaps = 0/408 (0%) Strand=Plus/Plus Query 79380 CTCCATGAAGAGGTCCGGGATCCACAGGGCCGTGAAGAGGTCGCGGCAACGCATCTCCTC 79439 || |||||| || || |||||||| || || ||| | || || || | || || Sbjct 620133 CTTCATGAAAAGATCAGGGATCCAGAGAGCGTAGAACAAATCACGAGCTCGAACTTCTTC 620192 Query 79440 GTCGCCCTGGTTCAGACGCAGCTCGAGAAAGTCCATGATGTCGGCGTGCCACGGCTCCAG 79499 | || || || ||| || ||||| || || | | ||||||||||| || || || Sbjct 620193 TTTACCGTGATTTTTACGGAGATCGAGGAAATCGAAAACATCGGCGTGCCATGGTTCGAG 620252 Query 79500 ATAGATGGCGAACGAACCCTTGCGCTTGCCGCCGCCCTGGTTGACGTACCGGGCCGTGTT 79559 ||||| ||||| | ||| | |||| || || |||| |||||| | ||| || Sbjct 620253 GTAGATAGCGAAAGCACCTGGTCTCTTGTTACCACCTTGGTCGACGTATCTGGCGGTAGC 620312 Query 79560 GTTGAAAACTCGGAGCATGGGCACGATGCCGTCGGCGACGCCGTTCGTCCCGTTGATTCG 79619 || |||| ||| ||||| || ||||| |||| | | ||||| || ||| || Sbjct 620313 GTCGAAAGCTCTAAGCATTGGAACGATACCGTTAGAGTAACCGTTGGTACCGGCAATGTA 620372 Query 79620 TGTACCGCTCGCCCGAATGTTCGAGCAGTGGATTCCGATGCCCCCGGACCACTTGGAGAT 79679 || ||| | || || ||||| | ||||| ||||| || || | || ||||| Sbjct 620373 TGAACCTTTAGCACGGATGTTGTGGATGTGGAGACCGATACCACCAGCAGTTTTAGAGAT 620432 Query 79680 GTGCGCGCACTCCTTGAGCGTCTCGTAGATGCCCTCGATCGAGTCGTCCTTCATAGCGAC 79739 || || || ||| | || |||||||| || || || || || ||| || || Sbjct 620433 TTGAGCACAAATCTTCAAAGTGTCGTAGATACCGTCAATGGAATCTGAAGCCATGGCAAC 620492 Query 79740 CAGGAAGCAGCTCGACATCTGTGGGTTGTTCGTACCGGCGTTGAAGAG 79787 ||||| || |||||| || | || |||||||||||||| || Sbjct 620493 GAGGAAACATGACGACATTTGAGCGTGAGGTGTACCGGCGTTGAAAAG 620540 >seq13 Length=1031976 Score = 84.2 bits (92), Expect = 2e-11 Identities = 88/116 (76%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 60003 GTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGGC 60062 || ||||| |||||||| || || || ||| | | || ||||||||||| || ||||| Sbjct 741988 GTCGAAGGTATCTTCTTTTCAGGATCTTTCGCTTCCATCTTCTGGCTCAAGAAACGTGGT 742047 Query 60063 CTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCCCGGGACGAGGGCCTCCA 60118 | ||||| || ||| |||||||||||| || || ||||| || || || || || Sbjct 742048 TTGATGCCAGGATTGACTTTCTCCAACGAACTCATCTCCCGTGATGAAGGTCTTCA 742103 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548524594303200