Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeotremella_20fagi_20[genbank_20GCA_5F001599715.1_202016-03-01] 30 sequences; 22,649,946 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq8 152 6e-32 seq5 93.3 5e-14 seq2 82.4 8e-11 >seq8 Length=1407489 Score = 152 bits (168), Expect = 6e-32 Identities = 281/407 (69%), Gaps = 4/407 (1%) Strand=Plus/Minus Query 53294 CTGTTCAACGCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAG 53353 || |||||||| ||||| |||| |||| |||||| || ||||| || || ||| Sbjct 620540 CTTTTCAACGCCGGTACACCTCACGCTCAAATGTCGTCATGTTTCCTCGTTGCCATGGCT 620481 Query 53354 GATGACTCGATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGG 53413 || || || ||||| |||||||| || | ||| ||||| || ||||| || Sbjct 620480 TCAGATTCCATTGACGGTATCTACGACACTTTGAAGATTTGTGCTCAAATCTCTAAAACT 620421 Query 53414 TCGGGTGGTATCGGTATCCACTGCTCGAACGTCCGTGCGAACGGCACACCAATCAAGGGG 53473 | |||||||||||| ||||| | ||| ||||||| || || || || || Sbjct 620420 GCTGGTGGTATCGGTCTCCACATCCACAACATCCGTGCTAAAGGTTCATACATTGCCGGT 620361 Query 53474 ACGAACGGCGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGG 53533 || ||||| | | | || ||||| || ||||| | | ||| || || ||| | Sbjct 620360 ACCAACGGTTACTCTAACGGTATCGTTCCAATGCTTAGAGCTTTCGACGCTACCGCCAGA 620301 Query 53534 TACGTCAACCAGGGTGGTGGGAAGCG-CAAGGGGTCGTTCGCCATCTACCTCGAGCCGTG 53592 |||||| |||| |||||| ||| | | ||| | | ||||| ||||||||||| || || Sbjct 620300 TACGTCGACCAAGGTGGTAACAAGAGACCAGGTG-CTTTCGCTATCTACCTCGAACCATG 620242 Query 53593 GCACGCCGACATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCG 53652 ||||||||| || | || || ||||| || ||| ||||| ||| | ||||| | || Sbjct 620241 GCACGCCGATGTTTTCGATTTCCTCGATCTCCGTAAAAATCACGGTAAAGAAGAAGTTCG 620182 Query 53653 CTGCCGTGACCTGTT-TACAGCTCTGTGGATTCCGGACCTCTTCATG 53698 ||||| |||| ||| ||||| ||||| || || || |||||| Sbjct 620181 AGCTCGTGATTTGTTCTAC-GCTCTCTGGATCCCTGATCTTTTCATG 620136 >seq5 Length=1604251 Score = 93.3 bits (102), Expect = 5e-14 Identities = 87/111 (78%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 74769 CCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTTC 74828 || |||||||| || ||||| || |||||||||| | |||||||| | || | |||| Sbjct 1486538 CCCTCATCTCTACTGATCAACTCGTTCGAAAACGTTAAACCAGGCATCAAACCTCTCTTC 1486597 Query 74829 TTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGATGCCTTCGACA 74879 |||||||||||||| || ||| ||||| |||||||| ||||||||| Sbjct 1486598 TTCAACCAAAAGATAGCTGCGAAAGAACCTGAAAAGAAGATCCCTTCGACA 1486648 >seq2 Length=2299803 Score = 82.4 bits (90), Expect = 8e-11 Identities = 194/288 (67%), Gaps = 14/288 (5%) Strand=Plus/Minus Query 118016 CCCTTGATATGGGAACCGTCCAGATCCGCATCGGTCATGATCATCAGGCGGCCGTACCGT 118075 ||||||||||||||||| || |||| ||| ||||||||||||| | || || ||| Sbjct 1538038 CCCTTGATATGGGAACCATCATGATCTTGATCTGTCATGATCATCAAATGACCATAACGT 1537979 Query 118076 AAATCTCTCAG-GGAGTTATAAACCTTACCATGTTGGAGCCCGAGGATCTTTTT--AAGG 118132 ||| || |||| || | | ||||| | | ||||| | || | |||| ||| | | Sbjct 1537978 AAA-CTATCAGTGGTGGTGTAAACTTGATTATGTTTCAATCCTAAAATCTGTTTGATATG 1537920 Query 118133 TTGGAAAATTCCTCATTTTCCGTCACCTGTTTTATGGTG----GCGTCCCGAACGTTGCG 118188 ||| || || | |||| || | ||| || ||| || || || ||||| | Sbjct 1537919 TTG--AATCTCGACGTTTTTGGTGATCTG----ATCGTGTCCAGCTTCACGGACGTTTAG 1537866 Query 118189 CGGCTTACCCCGCAGTGGAAACACGCCAAACTTGTCACGGCCCACAACGCTCAAGCCGGC 118248 | ||||| || ||||| || || || | ||||||| || ||||| || |||| Sbjct 1537865 CAATTTACCACGAAGTGGGAAAACACCGTATGTGTCACGACCGACAACTGATAAACCGGA 1537806 Query 118249 AATAGCAAGGGCCTTCGCCGAGTCACCCTCGGTAATAATAAGAGTGCA 118296 | ||| || ||||| || || || || || |||| ||| || || || Sbjct 1537805 TACAGCGAGCGCCTTGGCTGAATCTCCTTCTGTAAGAATGAGGGTACA 1537758 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547215794794000