Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeotremella_20fagi_20[genbank_20GCA_5F001599715.1_202016-03-01] 30 sequences; 22,649,946 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq13 158 1e-33 seq8 122 1e-22 seq1 96.9 4e-15 >seq13 Length=1031976 Score = 158 bits (174), Expect = 1e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| || ||||| || || ||||| |||||||| || || || ||||| ||| | Sbjct 993420 ATGCAAATTTTCGTCAAAACCCTCACCGGAAAGACTATCACCCTCGAAGTTGAATCATCT 993479 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| || | ||| | ||| |||||||||| ||||| ||||| || || |||||||| Sbjct 993480 GATACTATCGACAATGTCAAGTCTAAAATTCAAGACAAAGAGGGTATCCCACCAGACCAA 993539 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | | || || |||||||| ||| | || |||| | | || || | || || || Sbjct 993540 CAGAGATTGATCTTCGCTGGTAAACAATTGGAAGATGGTAGAACTTTATCGGATTACAAC 993599 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 ||||||||||||| ||||||||| | ||| | ||||| | ||||| Sbjct 993600 ATCCAAAAGGAATCAACTCTTCATTTGGTCCTTCGTCTCAGAGGTGG 993646 Score = 141 bits (156), Expect = 1e-28 Identities = 153/203 (75%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||||||||| || || ||||| || || ||||| || ||||| || || || Sbjct 992964 ATGCAAATCTTTGTTAAAACTCTTACTGGTAAAACTATCACCCTTGAAGTCGAATCTTCA 993023 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||||| || | || | || || || |||||||| |||||||| |||||||| Sbjct 993024 GACACCATTGATAACGTTAAATCCAAGATCCAAGACAAGGAAGGAATTCCACCAGACCAA 993083 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||| | ||||| |||||||| ||| | ||||||| |||||| || | || || || Sbjct 993084 CAGCGTTTGATTTTCGCTGGTAAACAATTAGAGGATGGTCGTACACTCTCCGATTACAAC 993143 Query 27586 GTCCAAAAGGAATCCACTCTTCA 27608 | ||||| |||||||| || || Sbjct 993144 ATTCAAAAAGAATCCACCCTCCA 993166 Score = 111 bits (122), Expect = 2e-19 Identities = 147/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| ||||| || ||||| || || || || ||| | || ||||| ||| Sbjct 993192 ATGCAAATCTTCGTCAAAACTCTTACTGGTAAAACCATCACTTTGGAAGTTGAATCATCC 993251 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | || | || | || || || ||||| ||||| || || ||||| || Sbjct 993252 GACACCATCGACAACGTTAAATCCAAGATCCAAGACAAAGAGGGTATCCCACCAGATCAA 993311 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || | | ||||| || ||||| ||| | ||||| | |||||| || ||||||| || Sbjct 993312 CAAAGATTGATTTTCGCCGGTAAACAATTAGAGGACGGTCGTACACTCTCAGACTACAAC 993371 Query 27586 GTCCAAAAGGAATCCACTCTTCAT 27609 | ||||| ||||| || |||||| Sbjct 993372 ATTCAAAAAGAATCAACCCTTCAT 993395 >seq8 Length=1407489 Score = 122 bits (134), Expect = 1e-22 Identities = 471/734 (64%), Gaps = 17/734 (2%) Strand=Plus/Plus Query 80887 ACAAATGCCGGAAGGCTCAGGGACGCCAGATTGCACACGGCCACCTCTTCAGCATCTGTA 80946 ||||| || || || || || || ||||| || || || || || || | | | Sbjct 619789 ACAAAGGCAGGGAGAGCAAGAGAGGCGAGATTACAAACAGCGACTTCATCTGGGGCAGAG 619848 Query 80947 AACTCGACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTT 81006 | |||| |||||| || ||||| ||| ||||| |||||||| || | || ||||| Sbjct 619849 TATTCGATGATTTCAGTACACAAGTTACTTGACTTGATTGTACCAAGATGTTGGTGGTTG 619908 Query 81007 GACTTGGCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGAC 81066 || |||| |||| |||||||||||| |||| | ||| | || |||||| || | Sbjct 619909 GATTTGGAGTTGGCAGCGTCCTTGTAAAGCATGAAGGGGTTGCCAGTCTCGGTTTGAGCT 619968 Query 81067 TTGAGGATGGCGTCCCAAATCTCGCGCGCCTTGACCACCTTGCGGAATTTGCCTTCGGCC 81126 | ||| || ||| ||||| | | || |||| ||| | ||| || | | Sbjct 619969 TCGAGAATAGCGAACCAAAGTTTTTGAGCTTTGATGGTCTTTCTACCTTTACCAGCTTTC 620028 Query 81127 ACATACTTGGCGTAAGCTTCGTCGAACTTGGCACCGTGAAGTTCAGTGAGGTCTGGGCAC 81186 | || ||||| ||| ||||||| || ||||| || | || |||| || Sbjct 620029 TCGTATGATTCGTAAAGCTCGACGAACTTTTCAGAGTGAACATCGGCAAGACCTGGACAT 620088 Query 81187 TCGTTAGGGCACATCAGGTGCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAAGCGTCA 81246 || || ||||| ||| ||| || ||| || ||| |||||||||| ||| Sbjct 620089 TCAGCTGGACACATGAGGGTCCAATCTCCATCGGCTTCGACACGCTTCATGAAAAGATCA 620148 Query 81247 GGGATCCAGAGGGCGGTGAACAGGTCGCGGCAGCGCG--CCTCCTCATCACCCTGGTTGA 81304 ||||||||||| ||| ||||| || || ||| || | || || | ||| || || Sbjct 620149 GGGATCCAGAGAGCGTAGAACAAATCACG--AGCTCGAACTTCTTCTTTACCGTGATTTT 620206 Query 81305 GGCGCAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCGATCG 81364 || | ||||| || || | | || || |||||||| || || || | |||| | Sbjct 620207 TACGGAGATCGAGGAAATCGAAAACATCGGCGTGCCATGGTTCGAGGTAGATAGCGAAAG 620266 Query 81365 -AC-----CCCTTGCGACGGCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACAC 81418 || | |||| | ||||| |||| |||||| | ||| || |||| || | | Sbjct 620267 CACCTGGTCTCTTGTTA---CCACCTTGGTCGACGTATCTGGCGGTAGCGTCGAAAGCTC 620323 Query 81419 GCAACATAGGGATGATACCATCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGG 81478 | ||| || | |||||| | || | |||||| ||||| | || || || || | Sbjct 620324 TAAGCATTGGAACGATACCGTTAGAGTAACCGTTGGTACCGGCAATGTATGAACCTTTAG 620383 Query 81479 CGCGCACCTTGCTGATTGAAAGACCGATGCCACCTGACCACTTT--GAAATCTGAGCACA 81536 | || | ||| ||| |||||||| ||||| | || ||| || || |||||||| Sbjct 620384 CACGGATGTTGTGGATGTGGAGACCGATACCACC--AGCAGTTTTAGAGATTTGAGCACA 620441 Query 81537 CCGGTTCATGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACA 81596 |||| || || || || || || ||| |||| |||| ||| | |||||| Sbjct 620442 AATCTTCAAAGTGTCGTAGATACCGTCAATGGAATCTGAAGCCATGGCAACGAGGAAACA 620501 Query 81597 GCTTGACATCTGAG 81610 ||||| |||| Sbjct 620502 TGACGACATTTGAG 620515 >seq1 Length=2409791 Score = 96.9 bits (106), Expect = 4e-15 Identities = 131/183 (72%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 27427 CTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAG 27486 ||||| || || || || || || |||||||||||| || | ||| | || | || Sbjct 586309 CTTACGGGTAAAACCATCACCCTCGAGGTTGAGTCATCCGACACCATCGATAACGTTAAA 586250 Query 27487 GCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGT 27546 | ||||| || || || || || || || |||||||| || ||| | || || |||||| Sbjct 586249 TCCAAAATCCAAGATAAAGAAGGTATCCCACCAGACCAACAACGTTTGATCTTCGCTGGT 586190 Query 27547 AAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTT 27606 || ||| | || || | | | || || |||| || || ||||||||||||| || ||| Sbjct 586189 AAACAATTGGAAGACGGTAGAACTCTTTCAGATTACAACATCCAAAAGGAATCTACCCTT 586130 Query 27607 CAT 27609 ||| Sbjct 586129 CAT 586127 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570310186133600