Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeotremella_20fagi_20[genbank_20GCA_5F001599715.1_202016-03-01] 30 sequences; 22,649,946 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq13 138 7e-28 seq1 104 1e-17 >seq13 Length=1031976 Score = 138 bits (152), Expect = 7e-28 Identities = 158/210 (75%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 34498 ACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCA 34557 ||||| ||||| ||| || ||||||||||| ||||| || ||||| || | || || Sbjct 993172 ACCAAGTGGAGGGTGGATTCTTTTTGAATGTTGTAATCGGAGAGTGTACGACCATCCTCT 993113 Query 34558 AGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTG 34617 | ||||||||| || || || |||||||||||||| || || | ||| ||||||||| | Sbjct 993112 AATTGTTTACCAGCGAAAATCAAACGCTGTTGGTCTGGTGGAATTCCTTCCTTGTCTTGG 993053 Query 34618 ATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTT 34676 ||| || | ||||||| || ||| |||||| || ||||| | ||| || ||||| Sbjct 993052 ATC-TTGGATTTAACGTTATCAATGGTGTCTGAAGATTCGACTTCAAGGGTGATAGTTTT 992994 Query 34677 ACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||| || | ||||| ||||| || ||||| Sbjct 992993 ACCAGTAAGAGTTTTAACAAAGATTTGCAT 992964 Score = 102 bits (112), Expect = 5e-17 Identities = 150/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 34498 ACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCA 34557 |||||||| || || || ||||||||||| || ||||| ||||| || |||| || Sbjct 993400 ACCAAATGAAGGGTTGATTCTTTTTGAATGTTGTAGTCTGAGAGTGTACGACCGTCCTCT 993341 Query 34558 AGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTG 34617 | |||||||||||| || || || | ||||| || || || | ||||| |||||| | Sbjct 993340 AATTGTTTACCGGCGAAAATCAATCTTTGTTGATCTGGTGGGATACCCTCTTTGTCTTGG 993281 Query 34618 ATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTT 34676 ||| || | ||||||| | || ||||| || ||||||| || || ||||| Sbjct 993280 ATC-TTGGATTTAACGTTGTCGATGGTGTCGGATGATTCAACTTCCAAAGTGATGGTTTT 993222 Query 34677 ACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||| || | ||||| || || || ||||| Sbjct 993221 ACCAGTAAGAGTTTTGACGAAGATTTGCAT 993192 Score = 89.7 bits (98), Expect = 3e-13 Identities = 113/153 (74%), Gaps = 2/153 (1%) Strand=Plus/Minus Query 34531 TAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGG 34590 ||||| ||||| || || ||||||| |||||||||||||| || || ||||| |||||| Sbjct 992861 TAATCGGAAAGAGTACGGCCGTCTTCGAGTTGTTTACCGGCGAAAATCAAACGTTGTTGG 992802 Query 34591 TCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTC 34649 || || || | ||| || |||||| |||| || | || ||| | ||| |||||| Sbjct 992801 TCTGGTGGGATTCCTTCTTTGTCTTGGATC-TTAGACTTGACGTTGTCAATGGTGTCTGA 992743 Query 34650 GCTCTCCACTTCCACGGTTATCGTTTTACCGGT 34682 ||| || || | ||| || |||||||| || Sbjct 992742 AGACTCGACCTCAAGGGTGATGGTTTTACCAGT 992710 Score = 87.8 bits (96), Expect = 1e-12 Identities = 138/195 (71%), Gaps = 2/195 (1%) Strand=Plus/Minus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||| || |||||||| || || ||||||||| || || ||||| || | |||| Sbjct 993920 AGACGTAAAACCAAATGAAGTGTAGACTCCTTTTGGATATTGTAATCAGACAAGGTTCTA 993861 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | ||||| | |||||||||||||| || | | |||||||| || || | || || Sbjct 993860 CCATCTTCCAACTGTTTACCGGCAAAGATGAGTCTTTGTTGGTCTGGGGGGATACCTTCT 993801 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 || ||| ||| ||| | ||||||| || || || || | || ||||| | ||| Sbjct 993800 TTATCTTGGAT-TTTGGATTTAACGTTATCGATAGTATCAGAGGATTCGACTTCGAGGGT 993742 Query 34668 TATCGTTTTACCGGT 34682 || ||||||||||| Sbjct 993741 GATGGTTTTACCGGT 993727 >seq1 Length=2409791 Score = 104 bits (114), Expect = 1e-17 Identities = 136/186 (73%), Gaps = 2/186 (1%) Strand=Plus/Plus Query 34498 ACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCA 34557 |||||||| || || |||||||| ||||| ||||||||||| |||| ||||||| Sbjct 586122 ACCAAATGAAGGGTAGATTCCTTTTGGATGTTGTAATCTGAAAGAGTTCTACCGTCTTCC 586181 Query 34558 AGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTG 34617 | ||||||||| || || || ||||| |||||||| || || | || || || ||| | Sbjct 586182 AATTGTTTACCAGCGAAGATCAAACGTTGTTGGTCTGGTGGGATACCTTCTTTATCTTGG 586241 Query 34618 ATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTT 34676 || ||| | ||||||| || || ||||| ||| || || | ||| || ||||| Sbjct 586242 AT-TTTGGATTTAACGTTATCGATGGTGTCGGATGACTCAACCTCGAGGGTGATGGTTTT 586300 Query 34677 ACCGGT 34682 ||| || Sbjct 586301 ACCCGT 586306 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314729484926990