Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeotremella_20fagi_20[genbank_20GCA_5F001599715.1_202016-03-01] 30 sequences; 22,649,946 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq13 154 1e-32 seq1 129 5e-25 seq2 98.7 9e-16 >seq13 Length=1031976 Score = 154 bits (170), Expect = 1e-32 Identities = 172/230 (75%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || ||||| |||||||| || || || |||| || |||||||| ||| | || Sbjct 992964 ATGCAAATCTTTGTTAAAACTCTTACTGGTAAAACTATCACCCTTGAAGTCGAATCTTCA 993023 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | || ||| || || |||||||| ||||| || ||||| || ||| Sbjct 993024 GACACCATTGATAACGTTAAATCCAAGATCCAAGACAAGGAAGGAATTCCACCAGACCAA 993083 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||||| || | ||| || |||||||| || || || || | |||||||||||| Sbjct 993084 CAGCGTTTGATTTTCGCTGGTAAACAATTAGAGGATGGTCGTACACTCTCCGATTACAAC 993143 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 |||||||| || || ||| | || |||||| | | || || ||||| || Sbjct 993144 ATTCAAAAAGAATCCACCCTCCACTTGGTTCTCAGATTACGTGGTGGTAT 993193 Score = 140 bits (154), Expect = 3e-28 Identities = 169/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || ||||| || ||||| ||| |||| || || ||||| ||| | || Sbjct 993420 ATGCAAATTTTCGTCAAAACCCTCACCGGAAAGACTATCACCCTCGAAGTTGAATCATCT 993479 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | || || | ||||| ||||||||||||||||| || || ||||| || ||| Sbjct 993480 GATACTATCGACAATGTCAAGTCTAAAATTCAAGACAAAGAGGGTATCCCACCAGACCAA 993539 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | || || | ||| || |||||||||||||| || || | || ||||||||| Sbjct 993540 CAGAGATTGATCTTCGCTGGTAAACAATTGGAAGATGGTAGAACTTTATCGGATTACAAC 993599 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || |||||||| || || | |||||||| | ||| | | ||||| || Sbjct 993600 ATCCAAAAGGAATCAACTCTTCATTTGGTCCTTCGTCTCAGAGGTGGTAT 993649 Score = 136 bits (150), Expect = 3e-27 Identities = 168/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || |||||||| || || || | || ||| | ||||| ||| | ||| Sbjct 993192 ATGCAAATCTTCGTCAAAACTCTTACTGGTAAAACCATCACTTTGGAAGTTGAATCATCC 993251 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | || ||| || || ||||||||||| || || ||||| |||||| Sbjct 993252 GACACCATCGACAACGTTAAATCCAAGATCCAAGACAAAGAGGGTATCCCACCAGATCAA 993311 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | || || | |||||| |||||||| || ||| || || | || || |||||| Sbjct 993312 CAAAGATTGATTTTCGCCGGTAAACAATTAGAGGACGGTCGTACACTCTCAGACTACAAC 993371 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 |||||||| || || ||| | ||||||||| | | || || ||||| || Sbjct 993372 ATTCAAAAAGAATCAACCCTTCATTTGGTTCTTAGATTACGTGGTGGTAT 993421 Score = 113 bits (124), Expect = 4e-20 Identities = 149/207 (72%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 27008 TCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAA 27067 ||| ||||| || | || || || ||||| ||| | || || | || || | || || Sbjct 993723 TCTTACCGGTAAAACCATCACCCTCGAAGTCGAATCCTCTGATACTATCGATAACGTTAA 993782 Query 27068 ACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGG 27127 | ||||| ||||| |||||||| || || || || ||||| | | || | ||||| Sbjct 993783 ATCCAAAATCCAAGATAAAGAAGGTATCCCCCCAGACCAACAAAGACTCATCTTTGCCGG 993842 Query 27128 CAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTT 27187 ||||| |||||||| || ||| | || |||||||| || ||||||||||| || | Sbjct 993843 TAAACAGTTGGAAGATGGTAGAACCTTGTCTGATTACAATATCCAAAAGGAGTCTACACT 993902 Query 27188 ACATTTGGTTTTGCGTTTGCGGGGTGG 27214 ||||||||||| ||| | || ||||| Sbjct 993903 TCATTTGGTTTTACGTCTACGTGGTGG 993929 Score = 95.1 bits (104), Expect = 1e-14 Identities = 106/142 (75%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 27024 ATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGAC 27083 || || || || || ||| | || ||| | ||||| | |||||| || ||||||||| Sbjct 992397 ATCACACTCGAGGTTGAATCCTCTGACACCATTGACAATGTCAAATCCAAGATTCAAGAC 992456 Query 27084 AAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGAC 27143 || ||||| || ||||| |||||||| ||||| || | || || ||||||||||||||| Sbjct 992457 AAGGAAGGTATCCCACCTGATCAACAACGTTTGATCTTTGCTGGTAAACAATTGGAAGAC 992516 Query 27144 AGTTCGACCGTTTCCGATTACA 27165 || || |||| || |||| Sbjct 992517 GGTAGAACTCTTTCAGACTACA 992538 Score = 89.7 bits (98), Expect = 4e-13 Identities = 105/142 (74%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 27024 ATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGAC 27083 || || ||||| || || | || ||| | ||||| | ||||| || || |||||| Sbjct 992722 ATCACCCTTGAGGTCGAGTCTTCAGACACCATTGACAACGTCAAGTCTAAGATCCAAGAC 992781 Query 27084 AAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGAC 27143 |||||||| || ||||| || ||||| ||||| || | |||||| |||||| | |||||| Sbjct 992782 AAAGAAGGAATCCCACCAGACCAACAACGTTTGATTTTCGCCGGTAAACAACTCGAAGAC 992841 Query 27144 AGTTCGACCGTTTCCGATTACA 27165 | || |||||||||||| Sbjct 992842 GGCCGTACTCTTTCCGATTACA 992863 >seq1 Length=2409791 Score = 129 bits (142), Expect = 5e-25 Identities = 143/191 (75%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 27024 ATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGAC 27083 || || || || || || | |||||| | || || | || ||| ||||| ||||| Sbjct 586294 ATCACCCTCGAGGTTGAGTCATCCGACACCATCGATAACGTTAAATCCAAAATCCAAGAT 586235 Query 27084 AAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGAC 27143 |||||||| || ||||| || ||||| ||||| || | ||| || ||||||||||||||| Sbjct 586234 AAAGAAGGTATCCCACCAGACCAACAACGTTTGATCTTCGCTGGTAAACAATTGGAAGAC 586175 Query 27144 AGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGT 27203 || || |||| ||||||||||| |||||||| || ||| | ||||||||| | | Sbjct 586174 GGTAGAACTCTTTCAGATTACAACATCCAAAAGGAATCTACCCTTCATTTGGTTCTTAGA 586115 Query 27204 TTGCGGGGTGG 27214 || || ||||| Sbjct 586114 TTACGTGGTGG 586104 >seq2 Length=2299803 Score = 98.7 bits (108), Expect = 9e-16 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 27009 CTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAA 27068 || || || ||| | |||||||| || || ||| | |||||| | || || | |||||| Sbjct 838683 CTCACGGGAAAGACCATTACTCTCGAGGTCGAATCATCCGACACCATCGACAACGTCAAA 838624 Query 27069 CAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGC 27128 || || ||||| |||||||| || ||||| || ||||| || ||||| | ||| || Sbjct 838623 TCCAAGATCCAAGATAAAGAAGGAATCCCACCAGACCAACAACGATTAATTTTCGCTGGT 838564 Query 27129 AAACAATTGGAAGA 27142 |||||||||||||| Sbjct 838563 AAACAATTGGAAGA 838550 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434918236905600