Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeotremella_20fagi_20[genbank_20GCA_5F001599715.1_202016-03-01] 30 sequences; 22,649,946 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq13 140 8e-28 seq1 138 3e-27 seq2 131 4e-25 >seq13 Length=1031976 Score = 140 bits (154), Expect = 8e-28 Identities = 164/222 (74%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 ||| | ||| || || | ||| || ||||| |||||||| ||||| ||||| | || || Sbjct 993185 ACGTAATCTGAGAACCAAGTGGAGGGTGGATTCTTTTTGAATGTTGTAATCGGAGAGTGT 993126 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | ||||| || | || || || ||||| || | || |||||||| || |||| ||| Sbjct 993125 ACGACCATCCTCTAATTGTTTACCAGCGAAAATCAAACGCTGTTGGTCTGGTGGAATTCC 993066 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 ||||||||| |||||||| ||| ||||| || |||||||| || ||| || || || Sbjct 993065 TTCCTTGTCTTGGATCTTGGATTTAACGTTATCAATGGTGTCTGAAGATTCGACTTCAAG 993006 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| || || || || ||||| || ||||| | ||||| Sbjct 993005 GGTGATAGTTTTACCAGTAAGAGTTTTAACAAAGATTTGCAT 992964 Score = 131 bits (144), Expect = 4e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| | |||||||| || || ||||||||||| ||||||| | || || |||||| Sbjct 993631 AGGACCAAATGAAGAGTTGATTCCTTTTGGATGTTGTAATCCGATAAAGTTCTACCATCT 993572 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||| || || || |||||||| | | |||||||| || || | || || ||||| Sbjct 993571 TCCAATTGTTTACCAGCGAAGATCAATCTCTGTTGGTCTGGTGGGATACCCTCTTTGTCT 993512 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || || || || || || ||||| || ||||| |||||| ||||| ||||| ||| Sbjct 993511 TGAATTTTAGACTTGACATTGTCGATAGTATCAGATGATTCAACTTCGAGGGTGATAGTC 993452 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| ||||| || || || || | ||||| Sbjct 993451 TTTCCGGTGAGGGTTTTGACGAAAATTTGCAT 993420 Score = 118 bits (130), Expect = 2e-21 Identities = 119/155 (77%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 210939 TAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGG 210998 || || | ||| || || || ||||||| || || || || ||||| | |||||||| Sbjct 992536 TAGTCTGAAAGAGTTCTACCGTCTTCCAATTGTTTACCAGCAAAGATCAAACGTTGTTGA 992477 Query 210999 TCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAG 211058 ||||| || | ||||||||||| || ||||| ||| || || || |||||||||||| Sbjct 992476 TCAGGTGGGATACCTTCCTTGTCTTGAATCTTGGATTTGACATTGTCAATGGTGTCAGAG 992417 Query 211059 CTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAG 211093 |||||||||||| ||||| || || |||||||| Sbjct 992416 GATTCAACCTCGAGTGTGATGGTTTTACCCGTGAG 992382 Score = 107 bits (118), Expect = 4e-18 Identities = 157/222 (71%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 ||| | ||| || || | ||||| || || |||||||| ||||| || || | || || Sbjct 993413 ACGTAATCTAAGAACCAAATGAAGGGTTGATTCTTTTTGAATGTTGTAGTCTGAGAGTGT 993354 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | || || || | || || || ||||| || | | |||||| || || || | || Sbjct 993353 ACGACCGTCCTCTAATTGTTTACCGGCGAAAATCAATCTTTGTTGATCTGGTGGGATACC 993294 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 || ||||| |||||||| ||| ||||| ||||||||||| || |||||| || | Sbjct 993293 CTCTTTGTCTTGGATCTTGGATTTAACGTTGTCGATGGTGTCGGATGATTCAACTTCCAA 993234 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 |||||| || || || || ||||| || || || | ||||| Sbjct 993233 AGTGATGGTTTTACCAGTAAGAGTTTTGACGAAGATTTGCAT 993192 Score = 95.1 bits (104), Expect = 3e-14 Identities = 114/155 (74%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 210939 TAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGG 210998 ||||| | ||| || | || ||||| || || || || ||||| || | ||||||||| Sbjct 992861 TAATCGGAAAGAGTACGGCCGTCTTCGAGTTGTTTACCGGCGAAAATCAAACGTTGTTGG 992802 Query 210999 TCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAG 211058 || || || | |||||| ||||| |||||||| || ||||| || |||||||| || Sbjct 992801 TCTGGTGGGATTCCTTCTTTGTCTTGGATCTTAGACTTGACGTTGTCAATGGTGTCTGAA 992742 Query 211059 CTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAG 211093 || ||||| || ||||| || || || ||||| Sbjct 992741 GACTCGACCTCAAGGGTGATGGTTTTACCAGTGAG 992707 >seq1 Length=2409791 Score = 138 bits (152), Expect = 3e-27 Identities = 151/201 (75%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 ||| | ||| || || | ||||| || || || ||||||||||| ||||| | ||| || Sbjct 586109 ACGTAATCTAAGAACCAAATGAAGGGTAGATTCCTTTTGGATGTTGTAATCTGAAAGAGT 586168 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 || || ||||||| || || || |||||||| | ||||||||||| || || | || Sbjct 586169 TCTACCGTCTTCCAATTGTTTACCAGCGAAGATCAAACGTTGTTGGTCTGGTGGGATACC 586228 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 ||| || || ||||| || ||| ||||| ||||||||||| || ||||||||||| Sbjct 586229 TTCTTTATCTTGGATTTTGGATTTAACGTTATCGATGGTGTCGGATGACTCAACCTCGAG 586288 Query 211073 AGTGATCGTCTTTCCCGTGAG 211093 ||||| || || ||||| || Sbjct 586289 GGTGATGGTTTTACCCGTAAG 586309 >seq2 Length=2299803 Score = 131 bits (144), Expect = 4e-25 Identities = 122/155 (79%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 210939 TAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGG 210998 || || | ||| || ||||||||||||| || || || ||||| || | ||||||||| Sbjct 838529 TAGTCAGAAAGTGTTCTTCCATCTTCCAATTGTTTACCAGCGAAAATTAATCGTTGTTGG 838588 Query 210999 TCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAG 211058 || || || | |||||| || || |||||||| ||| ||||| ||||||||||| || Sbjct 838589 TCTGGTGGGATTCCTTCTTTATCTTGGATCTTGGATTTGACGTTGTCGATGGTGTCGGAT 838648 Query 211059 CTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAG 211093 ||| ||||||||||| || |||||||||||||| Sbjct 838649 GATTCGACCTCGAGAGTAATGGTCTTTCCCGTGAG 838683 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159151554450950