Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeotremella_20fagi_20[genbank_20GCA_5F001599715.1_202016-03-01] 30 sequences; 22,649,946 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq13 138 8e-28 seq1 111 1e-19 >seq13 Length=1031976 Score = 138 bits (152), Expect = 8e-28 Identities = 158/210 (75%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| |||||||| ||||||||||| ||||| || ||||| ||||||||||| || | Sbjct 993420 ATGCAAATTTTCGTCAAAACCCTCACCGGAAAGACTATCACCCTCGAAGTTGAATCATCT 993479 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 || ||| | || ||| | || | |||||| |||||||| ||| | || ||||| || Sbjct 993480 GATACTATCGACAATGTCAAGTC-TAAAATTCAAGACAAAGAGGGTATCCCACCAGACCA 993538 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 |||| | || || || || || |||||| ||||||| | | |||||| |||||||| Sbjct 993539 ACAGAGATTGATCTTCGCTGGTAAACAATTGGAAGATGGTAGAACTTTATCGGATTACAA 993598 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGT 23819 ||| ||||| || || || | ||||| || Sbjct 993599 CATCCAAAAGGAATCAACTCTTCATTTGGT 993628 Score = 116 bits (128), Expect = 3e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || || |||||||| || || || ||||| ||||| || ||||| || || | Sbjct 992964 ATGCAAATCTTTGTTAAAACTCTTACTGGTAAAACTATCACCCTTGAAGTCGAATCTTCA 993023 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| |||| || ||||| | || | | ||||| ||||| | || ||||| || Sbjct 993024 GACACCATTGATAACGTTAAATCCAAGA-TCCAAGACAAGGAAGGAATTCCACCAGACCA 993082 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||||||||| || || || || |||||| | || || | || || | ||||||||| Sbjct 993083 ACAGCGTTTGATTTTCGCTGGTAAACAATTAGAGGATGGTCGTACACTCTCCGATTACAA 993142 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 ||| |||||||| ||||| | || || ||| | || || || || || Sbjct 993143 CATTCAAAAAGAATCCACCCTCCACTTGGTTCTCAGATTACGTGGTGG 993190 Score = 111 bits (122), Expect = 1e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || ||||| ||||| || || || ||||| |||||| | |||||||| || | Sbjct 993192 ATGCAAATCTTCGTCAAAACTCTTACTGGTAAAACCATCACTTTGGAAGTTGAATCATCC 993251 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || || ||||| | || | | |||||||| ||| | || |||||||| Sbjct 993252 GACACCATCGACAACGTTAAATCCAAGA-TCCAAGACAAAGAGGGTATCCCACCAGATCA 993310 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | || || || ||||| |||||| | || |||| || || | || ||||| Sbjct 993311 ACAAAGATTGATTTTCGCCGGTAAACAATTAGAGGACGGTCGTACACTCTCAGACTACAA 993370 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 ||| |||||||| || || | ||||| ||| | || || || || || Sbjct 993371 CATTCAAAAAGAATCAACCCTTCATTTGGTTCTTAGATTACGTGGTGG 993418 Score = 82.4 bits (90), Expect = 5e-11 Identities = 113/158 (72%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 23631 CCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACGGACACTGTTGAAATATTAAA 23690 |||||| || ||||| ||||| || || || || || | ||||| |||| | | || Sbjct 992706 CCTCACTGGTAAAACCATCACCCTTGAGGTCGAGTCTTCAGACACCATTGACAACGTCAA 992765 Query 23691 ACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAACAGCGTTTAATATTTGCCGG 23750 || || ||||||||||| | || ||||| ||||| ||||| || || ||||| Sbjct 992766 GTCTAAGATCCAAGACAAAGAAGGAATCCCACCAGACCAACAACGTTTGATTTTCGCCGG 992825 Query 23751 CAAACAACTGGAAGACGAACGCACTTTAGGCGATTACA 23788 |||||||| ||||||| || ||| | |||||||| Sbjct 992826 TAAACAACTCGAAGACGGCCGTACTCTTTCCGATTACA 992863 >seq1 Length=2409791 Score = 111 bits (122), Expect = 1e-19 Identities = 151/208 (73%), Gaps = 2/208 (1%) Strand=Plus/Minus Query 23631 CCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACGGACACTGTTGA-AATATTAA 23689 ||| ||||| ||||| ||||| ||||| ||||| || | ||||| | || || |||| Sbjct 586310 CCTTACGGGTAAAACCATCACCCTCGAGGTTGAGTCATCCGACACCATCGATAACGTTAA 586251 Query 23690 AACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAACAGCGTTTAATATTTGCCG 23749 | | |||| | || ||||||||| | || ||||| ||||| ||||| || || || | Sbjct 586250 ATCCAAAA-TCCAAGATAAAGAAGGTATCCCACCAGACCAACAACGTTTGATCTTCGCTG 586192 Query 23750 GCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAACATACAAAAAGAGTCCACAT 23809 | |||||| ||||||||| | ||| | ||||||||||| ||||| || || || Sbjct 586191 GTAAACAATTGGAAGACGGTAGAACTCTTTCAGATTACAACATCCAAAAGGAATCTACCC 586132 Query 23810 TACATTTAGTTTTAAGGTTGCGAGGAGG 23837 | ||||| ||| | || || || || || Sbjct 586131 TTCATTTGGTTCTTAGATTACGTGGTGG 586104 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338009476415240