Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeotremella_20fagi_20[genbank_20GCA_5F001599715.1_202016-03-01] 30 sequences; 22,649,946 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq13 140 8e-28 seq1 118 3e-21 seq8 98.7 2e-15 seq2 95.1 3e-14 >seq13 Length=1031976 Score = 140 bits (154), Expect = 8e-28 Identities = 164/222 (74%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| | ||| || || | |||||| |||||||||||||| | |||||||||| | || Sbjct 993185 ACGTAATCTGAGAACCAAGTGGAGGGTGGATTCTTTTTGAATGTTGTAATCGGAGAGTGT 993126 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | ||||| |||| || || |||||||| || | || |||||||| || ||||| || Sbjct 993125 ACGACCATCCTCTAATTGTTTACCAGCGAAAATCAAACGCTGTTGGTCTGGTGGAATTCC 993066 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||||||||||||||| || || || ||||||||||| | ||| || || | Sbjct 993065 TTCCTTGTCTTGGATCTTGGATTTAACGTTATCAATGGTGTCTGAAGATTCGACTTCAAG 993006 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| || || || || | |||||| | || | |||||| Sbjct 993005 GGTGATAGTTTTACCAGTAAGAGTTTTAACAAAGATTTGCAT 992964 Score = 134 bits (148), Expect = 3e-26 Identities = 157/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| | || ||||| ||||| ||||||| |||||||| | |||||||| |||||| Sbjct 993631 AGGACCAAATGAAGAGTTGATTCCTTTTGGATGTTGTAATCCGATAAAGTTCTACCATCT 993572 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || | || || ||||||||||| | || |||||||| || || ||||| || |||||| Sbjct 993571 TCCAATTGTTTACCAGCGAAGATCAATCTCTGTTGGTCTGGTGGGATACCCTCTTTGTCT 993512 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || || || ||| ||| ||||| || || || | ||| || || | ||||| ||| Sbjct 993511 TGAATTTTAGACTTGACATTGTCGATAGTATCAGATGATTCAACTTCGAGGGTGATAGTC 993452 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || || | ||||| | ||| | |||||| Sbjct 993451 TTTCCGGTGAGGGTTTTGACGAAAATTTGCAT 993420 Score = 107 bits (118), Expect = 5e-18 Identities = 157/222 (71%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| | ||| || || | || || || ||||||||||| | ||||| || | | || Sbjct 993413 ACGTAATCTAAGAACCAAATGAAGGGTTGATTCTTTTTGAATGTTGTAGTCTGAGAGTGT 993354 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | || || |||| || || || ||||| || | || |||||| || || || ||||| Sbjct 993353 ACGACCGTCCTCTAATTGTTTACCGGCGAAAATCAATCTTTGTTGATCTGGTGGGATACC 993294 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 || |||||||||||||| || || ||||||||||| || | ||| || || || Sbjct 993293 CTCTTTGTCTTGGATCTTGGATTTAACGTTGTCGATGGTGTCGGATGATTCAACTTCCAA 993234 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| || || || || | |||||| | ||| | |||||| Sbjct 993233 AGTGATGGTTTTACCAGTAAGAGTTTTGACGAAGATTTGCAT 993192 Score = 98.7 bits (108), Expect = 2e-15 Identities = 116/157 (74%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 225533 CATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTT 225592 || |||| || | | |||||| || ||||| | || || ||||| ||||| | |||| Sbjct 992541 CACTGTAGTCTGAAAGAGTTCTACCGTCTTCCAATTGTTTACCAGCAAAGATCAAACGTT 992482 Query 225593 GTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGT 225652 |||| || || || ||||||||||||||||| ||||| || ||| || ||||||| Sbjct 992481 GTTGATCAGGTGGGATACCTTCCTTGTCTTGAATCTTGGATTTGACATTGTCAATGGTGT 992422 Query 225653 CTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGT 225689 | |||| ||| || || | ||||| || || ||||| Sbjct 992421 CAGAGGATTCAACCTCGAGTGTGATGGTTTTACCCGT 992385 Score = 89.7 bits (98), Expect = 1e-12 Identities = 112/154 (73%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 225536 TGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTT 225595 ||||||||| | ||| | || ||||| || || || || ||||| || | ||||||| Sbjct 992863 TGTAATCGGAAAGAGTACGGCCGTCTTCGAGTTGTTTACCGGCGAAAATCAAACGTTGTT 992804 Query 225596 GGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTG 225655 |||| || || || ||||| |||||||||||||| ||| || || |||||||||| Sbjct 992803 GGTCTGGTGGGATTCCTTCTTTGTCTTGGATCTTAGACTTGACGTTGTCAATGGTGTCTG 992744 Query 225656 AGGTTTCCACGTCTAACGTGATCGTCTTGCCCGT 225689 | | || || || | ||||| || || || || Sbjct 992743 AAGACTCGACCTCAAGGGTGATGGTTTTACCAGT 992710 >seq1 Length=2409791 Score = 118 bits (130), Expect = 3e-21 Identities = 147/199 (74%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| | ||| || || | || || || ||||| ||||||| |||||||| | | ||| Sbjct 586109 ACGTAATCTAAGAACCAAATGAAGGGTAGATTCCTTTTGGATGTTGTAATCTGAAAGAGT 586168 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 ||| || ||||| | || || ||||||||||| | ||||||||||| || || ||||| Sbjct 586169 TCTACCGTCTTCCAATTGTTTACCAGCGAAGATCAAACGTTGTTGGTCTGGTGGGATACC 586228 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCT-TCGATGGTGTCTGAGGTTTCCACGTCTA 225670 ||| || |||||||| ||| | || | | | ||||||||||| || | || || || | Sbjct 586229 TTCTTTATCTTGGAT-TTTGGATTTAACGTTATCGATGGTGTCGGATGACTCAACCTCGA 586287 Query 225671 ACGTGATCGTCTTGCCCGT 225689 ||||| || || ||||| Sbjct 586288 GGGTGATGGTTTTACCCGT 586306 >seq8 Length=1407489 Score = 98.7 bits (108), Expect = 2e-15 Identities = 171/246 (70%), Gaps = 2/246 (1%) Strand=Plus/Plus Query 193524 GCGTCTTTGTAGACGATGAAGGGCATGCCCACCTCCGCTTGAGCGACGAGAAT-GTGATG 193582 ||||| ||||| | |||||||| |||| ||| | |||||| ||||||| | || Sbjct 619924 GCGTCCTTGTAAAGCATGAAGGGGTTGCCAGTCTCGGTTTGAGCTTCGAGAATAGCGAA- 619982 Query 193583 CCAAAGTTCTTGAGCTTTCACTGTCGTTCTGGCCTTTCCTTCCCTCTCGTACTTTTCGTA 193642 |||||||| ||||||||| | ||| |||| | || || | ||||||| |||||| Sbjct 619983 CCAAAGTTTTTGAGCTTTGATGGTCTTTCTACCTTTACCAGCTTTCTCGTATGATTCGTA 620042 Query 193643 CAGTTCCTCAAAATCTTGTCCGTAGATTTCGTCGAGACCGGGAGCTTCCTTTGGGCAAAA 193702 || || | || | || || | ||| | ||||| ||| ||| ||| || | Sbjct 620043 AAGCTCGACGAACTTTTCAGAGTGAACATCGGCAAGACCTGGACATTCAGCTGGACACAT 620102 Query 193703 GAGACTCCAATCTCCATCACTTTCCACCCTCTTCATGAAGAGGTCAGATGTCCAAATGGC 193762 ||| ||||||||||||| ||| || | ||||||||| || |||| |||| | || Sbjct 620103 GAGGGTCCAATCTCCATCGGCTTCGACACGCTTCATGAAAAGATCAGGGATCCAGAGAGC 620162 Query 193763 GTAGAA 193768 |||||| Sbjct 620163 GTAGAA 620168 >seq2 Length=2299803 Score = 95.1 bits (104), Expect = 3e-14 Identities = 105/140 (75%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 225550 GTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATA 225609 ||||| |||||||| | || || |||||||| || | |||||||||||| || || || Sbjct 838541 GTTCTTCCATCTTCCAATTGTTTACCAGCGAAAATTAATCGTTGTTGGTCTGGTGGGATT 838600 Query 225610 CCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCT 225669 ||||| || ||||||||||| || || ||||||||||| || | ||| || || Sbjct 838601 CCTTCTTTATCTTGGATCTTGGATTTGACGTTGTCGATGGTGTCGGATGATTCGACCTCG 838660 Query 225670 AACGTGATCGTCTTGCCCGT 225689 | || || ||||| ||||| Sbjct 838661 AGAGTAATGGTCTTTCCCGT 838680 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192530741620820