Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeotremella_20fagi_20[genbank_20GCA_5F001599715.1_202016-03-01] 30 sequences; 22,649,946 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq8 131 2e-25 seq13 107 3e-18 seq5 86.0 9e-12 >seq8 Length=1407489 Score = 131 bits (144), Expect = 2e-25 Identities = 272/405 (67%), Gaps = 0/405 (0%) Strand=Plus/Plus Query 77942 AACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTT 78001 |||||| | | || || |||||| ||| ||||| | | ||| || ||||| | | Sbjct 620067 AACATCGGCAAGACCTGGACATTCAGCTGGACACATGAGGGTCCAATCTCCATCGGCTTC 620126 Query 78002 AACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATG 78061 || || ||||| || |||||||| ||||| ||||| || | ||| || | || | Sbjct 620127 GACACGCTTCATGAAAAGATCAGGGATCCAGAGAGCGTAGAACAAATCACGAGCTCGAAC 620186 Query 78062 TTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGG 78121 |||||| || || ||| || |||||||| || || | || ||| | |||||||| Sbjct 620187 TTCTTCTTTACCGTGATTTTTACGGAGATCGAGGAAATCGAAAACATCGGCGTGCCATGG 620246 Query 78122 TTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGC 78181 ||| || || || || | | | || |||| || ||||| || || || | |||||||| Sbjct 620247 TTCGAGGTAGATAGCGAAAGCACCTGGTCTCTTGTTACCACCTTGGTCGACGTATCTGGC 620306 Query 78182 GGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGA 78241 ||| | || |||| | |||||||| ||||||||||| || || || || | Sbjct 620307 GGTAGCGTCGAAAGCTCTAAGCATTGGAACGATACCGTTAGAGTAACCGTTGGTACCGGC 620366 Query 78242 AATATAACTTCCACTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTGCCATCTT 78301 ||| || || | || || || || ||| | || || || || || | || Sbjct 620367 AATGTATGAACCTTTAGCACGGATGTTGTGGATGTGGAGACCGATACCACCAGCAGTTTT 620426 Query 78302 AGATATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCTAT 78346 ||| ||| |||| ||| ||||| || ||||||||||| || || Sbjct 620427 AGAGATTTGAGCACAAATCTTCAAAGTGTCGTAGATACCGTCAAT 620471 Score = 86.0 bits (94), Expect = 9e-12 Identities = 165/243 (68%), Gaps = 3/243 (1%) Strand=Plus/Plus Query 76805 GGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATG 76864 ||||||||| | || ||||| ||| || || | || |||| |||||||| || Sbjct 618875 GGGTTTTGTTCTAAGGTAGTAACAACCGGTCTTCAATCCTCTCTTCCAACCGTAGAAGTG 618934 Query 76865 CATGCTTGTCAGTTTGGAATAACTAGGATCGGCTATATGAATATTCATCGACTGACTTTG 76924 |||| || | || || || || | ||| | ||| || || | || ||| ||| Sbjct 618935 CATGGACGTTAATTGTGAGAAAGATGGGTTGGCAAGATGGATGTTGAGGGATTGAGATTG 618994 Query 76925 ATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCA 76984 ||| | ||||||||| | |||||| || | | || | | ||||||| ||||||||| Sbjct 618995 ATCAAGGAAAGCTCCACGATCAGCGGCAAGATCAATGACAGCTTTTTGAGAAATTTCCCA 619054 Query 76985 AATAGTTTTGAAAACTTGTTTGATATCATCTGGAAGGTTTG---TATTTTGAATGGAACC 77041 || ||| ||| | | ||| | ||| |||||| | || | |||||||||||||| Sbjct 619055 AACAGTCTTGTAGATAGCTTTCAAATCGGCTGGAATGGATGGAATGTTTTGAATGGAACC 619114 Query 77042 ACC 77044 ||| Sbjct 619115 ACC 619117 >seq13 Length=1031976 Score = 107 bits (118), Expect = 3e-18 Identities = 128/174 (74%), Gaps = 0/174 (0%) Strand=Plus/Minus Query 48122 CAAATGTTTAAACATTAAACATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAA 48181 |||||| | || | ||||| || |||||| |||||||||||||| | || | Sbjct 742137 CAAATGAGTGAAGAGCAAACAAGCGAAATCAGTGTGAAGACCTTCATCACGGGAGATGAG 742078 Query 48182 TTCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGC 48241 |||||| || || || | || ||||| | |||||||| |||||||| || || | || Sbjct 742077 TTCGTTGGAGAAAGTCAATCCTGGCATCAAACCACGTTTCTTGAGCCAGAAGATGGAAGC 742018 Query 48242 GAAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTC 48295 ||||||||| |||||||| || ||||| || || || || ||| | | |||||| Sbjct 742017 GAAAGATCCTGAAAAGAAGATACCTTCGACAGCGGCGAAGGCGATCAATCTCTC 741964 >seq5 Length=1604251 Score = 86.0 bits (94), Expect = 9e-12 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 48162 CCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTT 48221 || ||||||||||| || || ||||| ||||| || | ||| ||||| | || | || Sbjct 1486538 CCCTCATCTCTACTGATCAACTCGTTCGAAAACGTTAAACCAGGCATCAAACCTCTCTTC 1486597 Query 48222 TTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAAT 48281 || | |||||| || || |||||||| || |||||||| || ||||| || || || || Sbjct 1486598 TTCAACCAAAAGATAGCTGCGAAAGAACCTGAAAAGAAGATCCCTTCGACAGCTGCGAAA 1486657 Query 48282 GC 48283 || Sbjct 1486658 GC 1486659 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694668539499200