Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeotremella_20fagi_20[genbank_20GCA_5F001599715.1_202016-03-01] 30 sequences; 22,649,946 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq8 147 3e-30 seq13 122 1e-22 seq5 104 3e-17 >seq8 Length=1407489 Score = 147 bits (162), Expect = 3e-30 Identities = 440/676 (65%), Gaps = 10/676 (1%) Strand=Plus/Plus Query 76271 AGAGCTATAGATGCTAGATTACAAACGGCTACCTCATTAGCATTGGCA---TATTGTATT 76327 ||||| | ||| || ||||||||||| || || |||| | |||| |||| || Sbjct 619801 AGAGCAAGAGAGGCGAGATTACAAACAGCGACTTCATCTGG---GGCAGAGTATTCGATG 619857 Query 76328 ATCTCCGTGCATAGATTACTACACTTGATAGTTCCAAGATTTTGTTGGTTGCTCTTTTTG 76387 || || || || | ||||| ||||||| || ||||||| ||| |||||| || | Sbjct 619858 ATTTCAGTACACAAGTTACTTGACTTGATTGTACCAAGATGTTGGTGGTTGGATTTGGAG 619917 Query 76388 TTACATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCAATCTGTGATTCGATAATA 76447 || | |||||| ||||| | || || | ||||| || | || | ||||| |||| Sbjct 619918 TTGGCAGCGTCCTTGTAAAGCATGAAGGGGTTGCCAGTCTCGGTTTGAGCTTCGAGAATA 619977 Query 76448 GATTTCCAGACGACTCTAGCTTTTATTATAGATTTGTATCGCTTCTCTCTTTCA--TATT 76505 | ||| | | |||||| || | ||| || | | | ||||| ||| Sbjct 619978 GCGAACCAAAGTTTTTGAGCTTTGATGGTC--TTTCTACCTTTACCAGCTTTCTCGTATG 620035 Query 76506 GTGTATATAACCGTTCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCG 76565 | || | | | || | || |||||| | | ||| ||||||||| | Sbjct 620036 ATTCGTAAAGCTCGACGAACTTTTCAGAGTGAACATCGGCAAGACCTGGACATTCAGCTG 620095 Query 76566 GACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCC 76625 ||||||| | | ||| || ||||| | | || || ||||| || |||||||| |||| Sbjct 620096 GACACATGAGGGTCCAATCTCCATCGGCTTCGACACGCTTCATGAAAAGATCAGGGATCC 620155 Query 76626 ATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGAT 76685 | ||||| || | ||| || | || | |||||| || || ||| || |||| Sbjct 620156 AGAGAGCGTAGAACAAATCACGAGCTCGAACTTCTTCTTTACCGTGATTTTTACGGAGAT 620215 Query 76686 CTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTC 76745 | ||||| || | || ||| | ||||||||||| || || || || | | |||| |||| Sbjct 620216 CGAGGAAATCGAAAACATCGGCGTGCCATGGTTCGAGGTAGATAGCGAAAGCACCTGGTC 620275 Query 76746 GTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAA 76805 || ||||| || || || | |||||||| || | || |||| | |||||||| Sbjct 620276 TCTTGTTACCACCTTGGTCGACGTATCTGGCGGTAGCGTCGAAAGCTCTAAGCATTGGAA 620335 Query 76806 TAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTAC 76865 || |||||||| ||| || || || | ||| || || ||||| || || Sbjct 620336 CGATACCGTTAGAGTAACCGTTGGTACCGGCAATGTATGAACCTTTAGCACGGATGTTGT 620395 Query 76866 TAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGT 76925 || || || || || || || ||||||||||| ||||||| ||||| |||| Sbjct 620396 GGATGTGGAGACCGATACCACCAGCAGTTTTAGAGATTTGAGCACAAATCTTCAAAGTGT 620455 Query 76926 CATAGATGCCCTCTAT 76941 | ||||| || || || Sbjct 620456 CGTAGATACCGTCAAT 620471 >seq13 Length=1031976 Score = 122 bits (134), Expect = 1e-22 Identities = 167/230 (73%), Gaps = 5/230 (2%) Strand=Plus/Minus Query 46610 TCAAATGTTTAAACATTAAACATGCAAAATCACAATGAAGGCCTTCATCTCTACTAATTA 46669 ||||||| | || | ||||| || |||||| ||||| |||||||| | || | Sbjct 742138 TCAAATGAGTGAAGAGCAAACAAGCGAAATCAGTGTGAAGACCTTCATCACGGGAGATGA 742079 Query 46670 ATTCGTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCG 46729 |||||| || || || | || ||||| | ||||| || |||||||| || || | | Sbjct 742078 GTTCGTTGGAGAAAGTCAATCCTGGCATCAAACCACGTTTCTTGAGCCAGAAGATGGAAG 742019 Query 46730 CGAAAGATCCAGAAAAGAATATGCCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGT 46789 |||||||||| |||||||| || ||||| ||||| ||||| |||| | |||||| || Sbjct 742018 CGAAAGATCCTGAAAAGAAGATACCTTCGACAGCGGCGAAGGCGATCAATCTCTCGGCGA 741959 Query 46790 AACTGGCATCAT---TATGA-ATCCACCTTTGAGCCCAATCAGCCTTTTT 46835 | | | ||| | | ||| ||||| | ||||||||||||||||||| Sbjct 741958 ATGTTG-ATCGTTCGTCTGAGATCCATTTGAGAGCCCAATCAGCCTTTTT 741910 >seq5 Length=1604251 Score = 104 bits (114), Expect = 3e-17 Identities = 96/122 (79%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 46651 CCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTTT 46710 || ||||||||||| || || ||||| ||||| || | |||||||| | || | ||| Sbjct 1486538 CCCTCATCTCTACTGATCAACTCGTTCGAAAACGTTAAACCAGGCATCAAACCTCTCTTC 1486597 Query 46711 TTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACAGCCGCGAAT 46770 || | |||||| ||||| |||||||| || |||||||| || ||||| ||||| ||||| Sbjct 1486598 TTCAACCAAAAGATAGCTGCGAAAGAACCTGAAAAGAAGATCCCTTCGACAGCTGCGAAA 1486657 Query 46771 GC 46772 || Sbjct 1486658 GC 1486659 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712934132649600