Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeotremella_20fagi_20[genbank_20GCA_5F001599715.1_202016-03-01] 30 sequences; 22,649,946 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq13 132 1e-25 seq1 100 7e-16 >seq13 Length=1031976 Score = 132 bits (146), Expect = 1e-25 Identities = 162/221 (73%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943 ||||| | ||||| | ||||||||| || || ||||||||||||||||| | ||||||| Sbjct 993640 CTGAGACGAAGGACCAAATGAAGAGTTGATTCCTTTTGGATGTTGTAATCCGATAAAGTT 993581 Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003 || |||||||| | ||| || |||||||| | ||||| ||||| | | ||| || Sbjct 993580 CTACCATCTTCCAATTGTTTACCAGCGAAGATCAATCTCTGTTGGTCTGGTGGGATACCC 993521 Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGA 152063 || || ||||||||||| |||||| | || | | || || || ||||| || Sbjct 993520 TCTTTGTCTTGAATTTTAGACTTGACATTGTCGATAGTATCAGATGATTCAACTTCGAGG 993461 Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || ||||| || || ||||| || || ||||| | ||||| Sbjct 993460 GTGATAGTCTTTCCGGTGAGGGTTTTGACGAAAATTTGCAT 993420 Score = 114 bits (126), Expect = 3e-20 Identities = 155/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 151889 TCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCC 151948 |||||| || | || || || || |||||||| ||||||||||||| | || | || Sbjct 993179 TCTGAGAACCAAGTGGAGGGTGGATTCTTTTTGAATGTTGTAATCGGAGAGTGTACGACC 993120 Query 151949 ATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTT 152008 ||| |||| ||| || ||||| || | | ||| ||||| | | ||||||||||| Sbjct 993119 ATCCTCTAATTGTTTACCAGCGAAAATCAAACGCTGTTGGTCTGGTGGAATTCCTTCCTT 993060 Query 152009 TTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAAT 152068 ||||| || || ||| || | || | | |||||||| || |||||||| || || Sbjct 993059 GTCTTGGATCTTGGATTTAACGTTATCAATGGTGTCTGAAGATTCGACTTCAAGGGTGAT 993000 Query 152069 AGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 |||||| || || ||||| || || |||| ||||| Sbjct 992999 AGTTTTACCAGTAAGAGTTTTAACAAAGATTTGCAT 992964 >seq1 Length=2409791 Score = 100 bits (110), Expect = 7e-16 Identities = 139/195 (71%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 151889 TCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCC 151948 ||| || || | |||||| ||||| || ||||||||||||||||| | | |||||| || Sbjct 586115 TCTAAGAACCAAATGAAGGGTAGATTCCTTTTGGATGTTGTAATCTGAAAGAGTTCTACC 586174 Query 151949 ATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTT 152008 ||||| | ||| || |||||||| | | || ||||| | | ||| ||||| || Sbjct 586175 GTCTTCCAATTGTTTACCAGCGAAGATCAAACGTTGTTGGTCTGGTGGGATACCTTCTTT 586234 Query 152009 TTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAAT 152068 ||||| ||||| ||| || | || | | |||| || ||| || || || || || Sbjct 586235 ATCTTGGATTTTGGATTTAACGTTATCGATGGTGTCGGATGACTCAACCTCGAGGGTGAT 586294 Query 152069 AGTTTTGCCCGTGAG 152083 ||||| ||||| || Sbjct 586295 GGTTTTACCCGTAAG 586309 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153820356500130