Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeotremella_20fagi_20[genbank_20GCA_5F001599715.1_202016-03-01] 30 sequences; 22,649,946 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq13 178 3e-39 seq1 143 6e-29 seq2 116 8e-21 >seq13 Length=1031976 Score = 178 bits (196), Expect = 3e-39 Identities = 176/228 (77%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| | | || |||| || | ||| ||||||||| |||||||| || | Sbjct 993191 ACCACCACGTAATCTGAGAACCAAGTGGAGGGTGGATTCTTTTTGAATGTTGTAATCGGA 993132 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || || |||||||||| |||||| || || || |||||||| |||||||| || Sbjct 993131 GAGTGTACGACCATCCTCTAATTGTTTACCAGCGAAAATCAAACGCTGTTGGTCTGGTGG 993072 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| || ||||||||||||||||| | ||| ||| |||| || ||||| |||| |||||| Sbjct 993071 AATTCCTTCCTTGTCTTGGATCTTGGATTTAACGTTATCAATGGTGTCTGAAGATTCGAC 993012 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||| || ||||| || ||||| || | ||| ||||| || || ||||| Sbjct 993011 TTCAAGGGTGATAGTTTTACCAGTAAGAGTTTTAACAAAGATTTGCAT 992964 Score = 168 bits (186), Expect = 1e-36 Identities = 174/228 (76%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| | | ||| |||| ||| | || ||||||||| ||||||||||| | Sbjct 993419 ACCACCACGTAATCTAAGAACCAAATGAAGGGTTGATTCTTTTTGAATGTTGTAGTCTGA 993360 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || || || ||||||| |||||| ||||| || ||||| | |||||| || || Sbjct 993359 GAGTGTACGACCGTCCTCTAATTGTTTACCGGCGAAAATCAATCTTTGTTGATCTGGTGG 993300 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 |||||||| |||||||||||||| | ||| ||| | ||||| ||||| || | ||| || Sbjct 993299 GATACCCTCTTTGTCTTGGATCTTGGATTTAACGTTGTCGATGGTGTCGGATGATTCAAC 993240 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||| | |||||| || ||||| || | ||| || ||||| || ||||| Sbjct 993239 TTCCAAAGTGATGGTTTTACCAGTAAGAGTTTTGACGAAGATTTGCAT 993192 Score = 132 bits (146), Expect = 1e-25 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| | || ||||| |||| ||| | || ||| |||||||||||||| || | Sbjct 993647 ACCACCTCTGAGACGAAGGACCAAATGAAGAGTTGATTCCTTTTGGATGTTGTAATCCGA 993588 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 | || | ||||| || | |||||| || || |||||||| | |||||||| || Sbjct 993587 TAAAGTTCTACCATCTTCCAATTGTTTACCAGCGAAGATCAATCTCTGTTGGTCTGGTGG 993528 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 |||||||| |||||||| || || | || || | |||||||| || || | ||| || Sbjct 993527 GATACCCTCTTTGTCTTGAATTTTAGACTTGACATTGTCGATAGTATCAGATGATTCAAC 993468 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 |||||| ||||| ||||| || || | || || ||||| || ||||| Sbjct 993467 TTCGAGGGTGATAGTCTTTCCGGTGAGGGTTTTGACGAAAATTTGCAT 993420 Score = 131 bits (144), Expect = 4e-25 Identities = 153/204 (75%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG-C 282931 |||||||| || || | |||| ||| | || || |||||||| ||||| |||| | Sbjct 993929 CCACCACGTAGACGTAAAACCAAATGAAGTGTAGACTCCTTTTGGATATTGTAATCAGAC 993870 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| || | ||||| || | ||||| ||||||||||| | | ||||||||| || Sbjct 993869 AAG-GTTCTACCATCTTCCAACTGTTTACCGGCAAAGATGAGTCTTTGTTGGTCTGGGGG 993811 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||||| || || |||||||| || | ||| ||| |||||||||| || || | |||||| Sbjct 993810 GATACCTTCTTTATCTTGGATTTTGGATTTAACGTTATCGATAGTATCAGAGGATTCGAC 993751 Query 283052 TTCGAGAGTGATCGTCTTACCCGT 283075 |||||| ||||| || ||||| || Sbjct 993750 TTCGAGGGTGATGGTTTTACCGGT 993727 Score = 120 bits (132), Expect = 6e-22 Identities = 119/154 (77%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 282922 TGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTT 282981 ||||||| | ||| || | || || || | |||||| || ||||||||||||||||||| Sbjct 992538 TGTAGTCTGAAAGAGTTCTACCGTCTTCCAATTGTTTACCAGCAAAGATCAAACGTTGTT 992479 Query 282982 GGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCG 283041 | ||| || ||||| ||||||||||| ||||| | ||| || | || || ||||| | Sbjct 992478 GATCAGGTGGGATACCTTCCTTGTCTTGAATCTTGGATTTGACATTGTCAATGGTGTCAG 992419 Query 283042 AAGCTTCGACTTCGAGAGTGATCGTCTTACCCGT 283075 | | ||| || ||||| ||||| || |||||||| Sbjct 992418 AGGATTCAACCTCGAGTGTGATGGTTTTACCCGT 992385 Score = 116 bits (128), Expect = 8e-21 Identities = 118/154 (77%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 282922 TGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTT 282981 |||| || | ||| || ||||| || || |||||||| ||||| || ||||||||||||| Sbjct 992863 TGTAATCGGAAAGAGTACGGCCGTCTTCGAGTTGTTTACCGGCGAAAATCAAACGTTGTT 992804 Query 282982 GGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCG 283041 |||| || || || || |||||||||||||| | || ||| | || || ||||| | Sbjct 992803 GGTCTGGTGGGATTCCTTCTTTGTCTTGGATCTTAGACTTGACGTTGTCAATGGTGTCTG 992744 Query 283042 AAGCTTCGACTTCGAGAGTGATCGTCTTACCCGT 283075 ||| ||||| || || ||||| || ||||| || Sbjct 992743 AAGACTCGACCTCAAGGGTGATGGTTTTACCAGT 992710 >seq1 Length=2409791 Score = 143 bits (158), Expect = 6e-29 Identities = 154/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| | | ||| |||| ||| | || ||| |||||||||||||| || | Sbjct 586103 ACCACCACGTAATCTAAGAACCAAATGAAGGGTAGATTCCTTTTGGATGTTGTAATCTGA 586162 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| || | || || || | |||||| || || |||||||||||||||||||| || Sbjct 586163 AAGAGTTCTACCGTCTTCCAATTGTTTACCAGCGAAGATCAAACGTTGTTGGTCTGGTGG 586222 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||||| || || |||||||| || | ||| ||| ||||||| ||||| || | || || Sbjct 586223 GATACCTTCTTTATCTTGGATTTTGGATTTAACGTTATCGATGGTGTCGGATGACTCAAC 586282 Query 283052 TTCGAGAGTGATCGTCTTACCCGT 283075 ||||| ||||| || |||||||| Sbjct 586283 CTCGAGGGTGATGGTTTTACCCGT 586306 >seq2 Length=2299803 Score = 116 bits (128), Expect = 8e-21 Identities = 118/154 (77%), Gaps = 0/154 (0%) Strand=Plus/Plus Query 282922 TGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTT 282981 ||||||||| ||| || | ||||| || | |||||| || || || || || ||||||| Sbjct 838527 TGTAGTCAGAAAGTGTTCTTCCATCTTCCAATTGTTTACCAGCGAAAATTAATCGTTGTT 838586 Query 282982 GGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCG 283041 |||| || || || || || ||||||||||| | ||| ||| | ||||| ||||| | Sbjct 838587 GGTCTGGTGGGATTCCTTCTTTATCTTGGATCTTGGATTTGACGTTGTCGATGGTGTCGG 838646 Query 283042 AAGCTTCGACTTCGAGAGTGATCGTCTTACCCGT 283075 | | |||||| |||||||| || ||||| ||||| Sbjct 838647 ATGATTCGACCTCGAGAGTAATGGTCTTTCCCGT 838680 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046738797659620