Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeotremella_20fagi_20[genbank_20GCA_5F001599715.1_202016-03-01] 30 sequences; 22,649,946 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq13 156 1e-32 seq1 145 2e-29 seq2 131 4e-25 >seq13 Length=1031976 Score = 156 bits (172), Expect = 1e-32 Identities = 166/219 (76%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||||||||| ||||| ||||| ||||| || ||||||||||| || ||| || || Sbjct 993423 CAAATTTTCGTCAAAACCCTCACCGGAAAGACTATCACCCTCGAAGTTGAATCATCTGAT 993482 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || ||||| || ||||| |||||||| || ||||| || ||||| || Sbjct 993483 ACTATCGACAATGTCAAGTCTAAAATTCAAGACAAAGAGGGTATCCCACCAGACCAACAG 993542 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | |||||||| || ||||| | |||||||| || ||| | | ||||| ||| || Sbjct 993543 AGATTGATCTTCGCTGGTAAACAATTGGAAGATGGTAGAACTTTATCGGATTACAACATC 993602 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 ||||| |||||||| || ||| | || | | |||||| Sbjct 993603 CAAAAGGAATCAACTCTTCATTTGGTCCTTCGTCTCAGA 993641 Score = 143 bits (158), Expect = 6e-29 Identities = 149/193 (77%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 177941 TCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAA 178000 ||| || || ||||| ||||||||||| || ||| ||| || || ||||| ||||| || Sbjct 993723 TCTTACCGGTAAAACCATCACCCTCGAAGTCGAATCCTCTGATACTATCGATAACGTTAA 993782 Query 178001 ACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGG 178060 | || || || || |||||||| ||||| || ||||| ||| |||| ||||| ||||| Sbjct 993783 ATCCAAAATCCAAGATAAAGAAGGTATCCCCCCAGACCAACAAAGACTCATCTTTGCCGG 993842 Query 178061 AAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGTCCAAAAAGAATCAACAC 178119 |||||| | |||||||| || || |||| | ||||| || ||||||| || || |||| Sbjct 993843 TAAACAGTTGGAAGATGGTAGAAC-CTTGTCTGATTACAATATCCAAAAGGAGTCTACAC 993901 Query 178120 TGCATCTTGTTTT 178132 | ||| | ||||| Sbjct 993902 TTCATTTGGTTTT 993914 Score = 141 bits (156), Expect = 2e-28 Identities = 157/208 (75%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || || |||||||| || || ||||| |||||||| || || ||| |||||| Sbjct 992967 CAAATCTTTGTTAAAACTCTTACTGGTAAAACTATCACCCTTGAAGTCGAATCTTCAGAC 993026 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || ||||| ||| ||||| || ||||| |||||||| || || ||||| || Sbjct 993027 ACCATTGATAACGTTAAATCCAAGATCCAAGACAAGGAAGGAATTCCACCAGACCAACAG 993086 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | || ||||| || ||||| | || ||||| | || || ||||||| ||| | Sbjct 993087 CGTTTGATTTTCGCTGGTAAACAATTAGAGGATGGTCGTACACTCTCCGATTACAACATT 993146 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTT 178131 ||||||||||| || || || |||| || Sbjct 993147 CAAAAAGAATCCACCCTCCA-CTTGGTT 993173 Score = 140 bits (154), Expect = 8e-28 Identities = 124/155 (80%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 177942 CTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAA 178001 ||||| || ||||| |||||||| ||||| || ||||||||||| || |||||||| Sbjct 992707 CTCACTGGTAAAACCATCACCCTTGAGGTCGAGTCTTCAGACACCATTGACAACGTCAAG 992766 Query 178002 CAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGA 178061 ||||| || ||||||||||||||||| || ||||| ||||| | || |||||||| Sbjct 992767 TCTAAGATCCAAGACAAAGAAGGAATCCCACCAGACCAACAACGTTTGATTTTCGCCGGT 992826 Query 178062 AAACAGCTCGAAGATGGAAGGACTCTTGCCGATTA 178096 ||||| |||||||| || | |||||| ||||||| Sbjct 992827 AAACAACTCGAAGACGGCCGTACTCTTTCCGATTA 992861 Score = 136 bits (150), Expect = 1e-26 Identities = 158/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| |||||||| || || ||||| ||||| | || || ||| || ||| Sbjct 993195 CAAATCTTCGTCAAAACTCTTACTGGTAAAACCATCACTTTGGAAGTTGAATCATCCGAC 993254 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| ||||| ||| ||||| || |||||||| || ||||| || || || ||| Sbjct 993255 ACCATCGACAACGTTAAATCCAAGATCCAAGACAAAGAGGGTATCCCACCAGATCAACAA 993314 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | || |||||||| ||||| | || || || | || || | || || ||| | Sbjct 993315 AGATTGATTTTCGCCGGTAAACAATTAGAGGACGGTCGTACACTCTCAGACTACAACATT 993374 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGA 178136 |||||||||||||| || ||| | ||| | ||| Sbjct 993375 CAAAAAGAATCAACCCTTCATTTGGTTCTTAGA 993407 >seq1 Length=2409791 Score = 145 bits (160), Expect = 2e-29 Identities = 149/195 (76%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 177942 CTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAA 178001 || || || ||||| |||||||||||||| || || ||||||||||| ||||| ||| Sbjct 586309 CTTACGGGTAAAACCATCACCCTCGAGGTTGAGTCATCCGACACCATCGATAACGTTAAA 586250 Query 178002 CAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGA 178061 || || || || |||||||| ||||| || ||||| ||||| | |||||||| || Sbjct 586249 TCCAAAATCCAAGATAAAGAAGGTATCCCACCAGACCAACAACGTTTGATCTTCGCTGGT 586190 Query 178062 AAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTG 178121 ||||| | ||||| || || |||||| | ||||| ||| ||||||| ||||| || || Sbjct 586189 AAACAATTGGAAGACGGTAGAACTCTTTCAGATTACAACATCCAAAAGGAATCTACCCTT 586130 Query 178122 CATCTTGTTTTGAGA 178136 ||| | ||| | ||| Sbjct 586129 CATTTGGTTCTTAGA 586115 >seq2 Length=2299803 Score = 131 bits (144), Expect = 4e-25 Identities = 122/155 (79%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 177942 CTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAA 178001 ||||| ||||| || || || |||||||| ||| || ||||||||||| ||||||||| Sbjct 838683 CTCACGGGAAAGACCATTACTCTCGAGGTCGAATCATCCGACACCATCGACAACGTCAAA 838624 Query 178002 CAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGA 178061 ||||| || || |||||||||||||| || ||||| |||||| | || ||||| || Sbjct 838623 TCCAAGATCCAAGATAAAGAAGGAATCCCACCAGACCAACAACGATTAATTTTCGCTGGT 838564 Query 178062 AAACAGCTCGAAGATGGAAGGACTCTTGCCGATTA 178096 ||||| | ||||||||||| || ||| | || || Sbjct 838563 AAACAATTGGAAGATGGAAGAACACTTTCTGACTA 838529 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203730737315820