Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeotremella_20skinneri_20[genbank_20GCA_5F001599695.1_202016-03- 01] 58 sequences; 20,788,256 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq7 114 3e-20 >seq7 Length=1014673 Score = 114 bits (126), Expect = 3e-20 Identities = 256/377 (68%), Gaps = 12/377 (3%) Strand=Plus/Plus Query 61080 CGAATTTGTCAAGCATCAACATCTGAACTGTATGGAAAAGTTCAAGAAATTCCTCAAACA 61139 ||| | | ||| || || || |||||| |||| || ||||| |||| || || ||| Sbjct 187365 CGATTCTATCAGGCTTCTACCTCTGAATTGTACGGTAAAGTGGTCGAAACCCCGCAGACA 187424 Query 61140 GAAAGGACTCCGTTTTATCCTCGTAGCCCGTATGGTGTTGCAAAACTATACGCTTACTGG 61199 || | ||| || || || ||| | || || || || |||||||| ||||| | |||| Sbjct 187425 GAGACGACCCCATTCTACCCTAGGTCGCCATACGGCGTGGCAAAACTGTACGCATTCTGG 187484 Query 61200 AT--TTGTAAAAATTACCGCGAGTCGTATGGAATGTTTGTATGTAACTCGATTTGTTTCA 61257 || | || || |||||| || || ||||||||||| ||| ||| |||| |||| Sbjct 187485 ATCGTCGTCAA--TTACCGGGAATCATATGGAATGTTCACATGCAACGGGATTCTGTTCA 187542 Query 61258 ATCACGAGAGTCCCAATAGAGGTC-ATCAGTTTGTGACTCGTAAAATTACGAAGGCGGTT 61316 | |||||| || |||||| | || ||||| || || || ||| | ||||| Sbjct 187543 ACCACGAGTCACCTCGCCGAGGTCGAACA-TTTGTAACACGAAAGATTTCTCGAGCGGTA 187601 Query 61317 GC--AAATATTTTTAACG-GTGTCGAAAAATGCATGTATCTAGGAAACATAGACTCTAAA 61373 || ||||| | | | | || | || ||||| | || || || | || ||| Sbjct 187602 GCCGAAATAGCTGCAGGGAAACTAGAGACAT---TGTATTTGGGGAATATCCATTCGAAA 187658 Query 61374 AGAGATTGGGGATATGCGGAAGATTATATCGAGGCTATGTGGTTGATGTTGCAACAAGAT 61433 ||||||||||| |||| |||| ||| | || | |||||| ||||| | |||||||| Sbjct 187659 AGAGATTGGGGCCATGCTAAAGACTATGTGGAAGGAATGTGGCTGATGCTCCAACAAGAC 187718 Query 61434 ACTCCAGATGACTACGT 61450 | || || |||| ||| Sbjct 187719 AAGCCGGAAGACTTCGT 187735 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057823213904540