Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phaeotremella_20skinneri_20[genbank_20GCA_5F001599695.1_202016-03-
01] 58 sequences; 20,788,256 total letters
Query= NC_001611.1
Length=185578
Score E
Sequences producing significant alignments: (Bits) Value
seq15 120 4e-22
seq5 120 4e-22
>seq15
Length=579413
Score = 120 bits (132), Expect = 4e-22
Identities = 154/210 (73%), Gaps = 3/210 (1%)
Strand=Plus/Minus
Query 24134 ACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAG 24193
||||||||| ||| ||| ||||||||||||| || | |||||||| || || |
Sbjct 218572 ACATGCGAAGTCGGTGTGCAGACCCTCGTCTCGGGAGATGAGCTCGTTGGAGAAGGTCAA 218513
Query 24194 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAA 24253
||||||||| || |||||||| || ||||| || ||||| || || || || || |||||
Sbjct 218512 TCCGGGCATGAGACCACGCTTCTTCAGCCAGAAGATGGAAGCGAAGGAACCGGAGAAGAA 218453
Query 24254 AATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATA--ACCGGCGCT-GTCATG 24310
|| || || || || |||||||| || |||| ||| || | | |||| |||
Sbjct 218452 GATACCCTCAACGGCGGCAAAGGCGATTAGTCGTTCGGCAAAGGTCGATCGCTCATCAGA 218393
Query 24311 TATCCACTTTTGAGCCCAATCGGCCTTCTT 24340
|||||||| ||||||| | ||| |||||
Sbjct 218392 GATCCACTTGAGAGCCCAGTTGGCTTTCTT 218363
>seq5
Length=1078720
Score = 120 bits (132), Expect = 4e-22
Identities = 467/733 (64%), Gaps = 46/733 (6%)
Strand=Plus/Minus
Query 53981 CCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATA 54040
|| || || || |||||||||||| | ||| || ||||| | || || |||||
Sbjct 587684 CCTGGGCACTCGGCCGGACACATCAGAGTCCAGTCGCCGTCGGATTCGACACGCTTCATG 587625
Query 54041 AAGAGATCAGGAATCCAAAGAGC-TATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCC 54099
|||||||| ||||||||||| || || || || ||||| | || |||||| |||||
Sbjct 587624 AAGAGATCGGGAATCCAAAGGGCGTAGAACAAG-TCTCTTGCTCGGACTTCCTCTTTTCC 587566
Query 54100 TGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATAT 54159
||||| | || ||||| | | | ||| | |||||| || || | ||| ||
Sbjct 587565 GTGGTTCTTACGCAAGTCCAGGAAGTCGAAGACATCGGCATGCCAAGGCTCAAGGTAGAT 587506
Query 54160 GGTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATA 54219
|| | | || || || ||||| || || || || | ||| | ||| ||| | | |
Sbjct 587505 GGCAAAGGCACCGGGGCGCTTGTTACCACCTTGGTCGACGTAACGAGCTGTGGCGTCAAA 587446
Query 54220 AACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCC 54279
||| || ||| || | ||||| || || || ||||| |||| || || ||
Sbjct 587445 GGCTCGCAGCATGGGGACGATACCGTTAGAGTAGCCGTTGGTGCCGGCAATGTATGAACC 587386
Query 54280 ACTGGCACGAATATTACTAATTGATAGACCTATCCCCCCTGCCATTTTAGAGATTAATGC 54339
||||||| || || || ||||| || || || || | || ||||| ||
Sbjct 587385 CTTGGCACGGATGTTGTGGATGTGGAGACCAATACCACCGGCGGTCTTGGAGATCTGAGC 587326
Query 54340 GCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAA 54399
|| || | || || ||||||||||| ||| |||||| |||| | || ||
Sbjct 587325 ACAGGTCTTGAGAGTGTCGTAGATGCCCTCAATAGAGTCATCCCGCATGGCGACGAGGAA 587266
Query 54400 ACAGCTAGACATTTG---GTGACGACTA-----GTTCCC--GC--ATTA---------AA 54438
||| |||||| || |||| || || ||| || |||| ||
Sbjct 587265 ACATGAAGACATCTGAGCGTGAGGAGTACCAGCGTTGAAAAGCTAATTATCAGCTTGGAA 587206
Query 54439 TAAGG---------------TAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATT 54483
|| | | || |||||||| || || | ||||| | || ||
Sbjct 587205 TACTGGTTTTTCACTCACAGTTGGGGAAGCGTGAGTGAAGTAACGCTCAGACATGAGGTT 587146
Query 54484 GTACGTCTCGATAGCTGAGTCTATATC----CCATTGATGAATTCCTACTGCGACACGCA 54539
||| ||||| || || ||| || | || | |||| || || ||||||||||
Sbjct 587145 GTAGGTCTCAATGACTTTGTCAATGTTGGCGCCGTGGATG----CCGACAGCGACACGCA 587090
Query 54540 TTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAGCAAGTAGGATTTTT 54599
| | |||||||||||||| ||| ||||||||| ||| || |||| ||| ||| |
Sbjct 587089 TGATCATGTGCTGAGGTCGTTCGACGATCTTGCCGTTGATGCGGAGCAGGTACGATCGCT 587030
Query 54600 CCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACTGAGT 54659
| | ||| || ||||| || |||||||| | ||||| || ||||| || || ||||||
Sbjct 587029 CAAGAGTCTTGAAACCGAAGTAGTTGTAAGCGAAGTCACGGTCGTAGATGATGGCTGAGT 586970
Query 54660 TGAGTTTATCCTT 54672
||| ||||||
Sbjct 586969 CGAGAGCATCCTT 586957
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593721169551840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |