Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeotremella_20skinneri_20[genbank_20GCA_5F001599695.1_202016-03- 01] 58 sequences; 20,788,256 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq1 134 1e-26 seq15 111 1e-19 >seq1 Length=3245857 Score = 134 bits (148), Expect = 1e-26 Identities = 154/207 (74%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 118511 ACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCT 118570 ||| || || || |||||||||| ||||| |||||||| || || |||||||| ||| Sbjct 3091583 ACCACCACGCAACCTCAACACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGA 3091524 Query 118571 CATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGG 118630 | ||| || ||||||||||||||| ||||| ||||||||||||| || || || || Sbjct 3091523 GAGAGTACGTCCATCCTCGAGCTGTTTACCAGCAAAGATGAGACGCTGTTGGTCTGGGGG 3091464 Query 118631 TATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGAC 118690 || ||||||||||| || || || || | |||| |||||||| ||| || Sbjct 3091463 GATACCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCCGAAGACTCAAC 3091404 Query 118691 CTCGACGGTCACCGTTTTGCCGGTCAG 118717 ||||| ||| | |||||||| || || Sbjct 3091403 CTCGAGGGTGATGGTTTTGCCCGTAAG 3091377 >seq15 Length=579413 Score = 111 bits (122), Expect = 1e-19 Identities = 150/208 (72%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 118532 CAAG-TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGA 118590 |||| || | ||||||||| || || || ||||| || || ||||||| |||||| | Sbjct 37887 CAAGATGAAGTGTAGACTCCTTCTGGATATTGTAGTCCGACAAAGTGCGCCCATCCTCCA 37946 Query 118591 GCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAA 118650 ||| || || ||| |||| ||||||||||| || || || || ||||||||||| | Sbjct 37947 ACTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGGATACCCTCCTTGTCCTGGA 38006 Query 118651 TTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGC 118710 |||| ||| || | || | ||| |||| ||| ||||| | || | || || | Sbjct 38007 TTTTGGATTTCACATTGTCTATGGTATCCGAAGACTCCACCTCAAGAGTAATGGTCTTTC 38066 Query 118711 CGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||| ||||| || || || |||||||| Sbjct 38067 CGGTAAGAGTCTTGACGAAGATCTGCAT 38094 Score = 95.1 bits (104), Expect = 1e-14 Identities = 114/155 (74%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 118584 TCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTG 118643 ||||| ||||| ||||||||| | || | |||||| || || ||||| |||||||||||| Sbjct 38444 TCCTCAAGCTGCTTTCCAGCGAAAATCAAACGCTGTTGGTCTGGAGGAATGCCCTCCTTG 38503 Query 118644 TCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACC 118703 || ||| || || || | |||| |||||| | | ||||||||| | || | Sbjct 38504 TCCTGAATCTTGGACTTGACGTTGTCGATGGTGTCTGAGGACTCGACCTCCAGAGTGATG 38563 Query 118704 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || |||||||| || || || || || || ||||| Sbjct 38564 GTCTTGCCGGTAAGGGTCTTAACGAAGATTTGCAT 38598 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433830093336136