Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phaeotremella_20skinneri_20[genbank_20GCA_5F001599695.1_202016-03-
01] 58 sequences; 20,788,256 total letters
Query= NC_002169.1
Length=135611
Score E
Sequences producing significant alignments: (Bits) Value
seq1 134 1e-26
seq15 111 1e-19
>seq1
Length=3245857
Score = 134 bits (148), Expect = 1e-26
Identities = 154/207 (74%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 118511 ACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCT 118570
||| || || || |||||||||| ||||| |||||||| || || |||||||| |||
Sbjct 3091583 ACCACCACGCAACCTCAACACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGA 3091524
Query 118571 CATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGG 118630
| ||| || ||||||||||||||| ||||| ||||||||||||| || || || ||
Sbjct 3091523 GAGAGTACGTCCATCCTCGAGCTGTTTACCAGCAAAGATGAGACGCTGTTGGTCTGGGGG 3091464
Query 118631 TATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGAC 118690
|| ||||||||||| || || || || | |||| |||||||| ||| ||
Sbjct 3091463 GATACCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCCGAAGACTCAAC 3091404
Query 118691 CTCGACGGTCACCGTTTTGCCGGTCAG 118717
||||| ||| | |||||||| || ||
Sbjct 3091403 CTCGAGGGTGATGGTTTTGCCCGTAAG 3091377
>seq15
Length=579413
Score = 111 bits (122), Expect = 1e-19
Identities = 150/208 (72%), Gaps = 1/208 (0%)
Strand=Plus/Plus
Query 118532 CAAG-TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGA 118590
|||| || | ||||||||| || || || ||||| || || ||||||| |||||| |
Sbjct 37887 CAAGATGAAGTGTAGACTCCTTCTGGATATTGTAGTCCGACAAAGTGCGCCCATCCTCCA 37946
Query 118591 GCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAA 118650
||| || || ||| |||| ||||||||||| || || || || ||||||||||| |
Sbjct 37947 ACTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGGATACCCTCCTTGTCCTGGA 38006
Query 118651 TTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGC 118710
|||| ||| || | || | ||| |||| ||| ||||| | || | || || |
Sbjct 38007 TTTTGGATTTCACATTGTCTATGGTATCCGAAGACTCCACCTCAAGAGTAATGGTCTTTC 38066
Query 118711 CGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|||| ||||| || || || ||||||||
Sbjct 38067 CGGTAAGAGTCTTGACGAAGATCTGCAT 38094
Score = 95.1 bits (104), Expect = 1e-14
Identities = 114/155 (74%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 118584 TCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTG 118643
||||| ||||| ||||||||| | || | |||||| || || ||||| ||||||||||||
Sbjct 38444 TCCTCAAGCTGCTTTCCAGCGAAAATCAAACGCTGTTGGTCTGGAGGAATGCCCTCCTTG 38503
Query 118644 TCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACC 118703
|| ||| || || || | |||| |||||| | | ||||||||| | || |
Sbjct 38504 TCCTGAATCTTGGACTTGACGTTGTCGATGGTGTCTGAGGACTCGACCTCCAGAGTGATG 38563
Query 118704 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| |||||||| || || || || || || |||||
Sbjct 38564 GTCTTGCCGGTAAGGGTCTTAACGAAGATTTGCAT 38598
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433830093336136
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |