Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phaeotremella_20skinneri_20[genbank_20GCA_5F001599695.1_202016-03-
01] 58 sequences; 20,788,256 total letters
Query= NC_002331.1
Length=178733
Score E
Sequences producing significant alignments: (Bits) Value
seq15 93.3 5e-14
seq1 89.7 6e-13
>seq15
Length=579413
Score = 93.3 bits (102), Expect = 5e-14
Identities = 150/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027
||||| || | ||| | ||| |||||| || |||||||| || | || ||| ||| |
Sbjct 37879 ACGCAGGACAAGATGAAGTGTAGACTCCTTCTGGATATTGTAGTCCGACAAAGTGCGCCC 37938
Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087
|| || | |||||| || ||||| || || ||||||||||| | || | | ||||||
Sbjct 37939 ATCCTCCAACTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGGATACCCTCCTT 37998
Query 43088 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGAT 43147
|||| |||||| ||| | | | | || || || ||||| || | || ||
Sbjct 37999 GTCCTGGATTTTGGATTTCACATTGTCTATGGTATCCGAAGACTCCACCTCAAGAGTAAT 38058
Query 43148 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
||| || || || || ||||| || ||||| |||||
Sbjct 38059 GGTCTTTCCGGTAAGAGTCTTGACGAAGATCTGCAT 38094
Score = 91.5 bits (100), Expect = 2e-13
Identities = 132/181 (73%), Gaps = 4/181 (2%)
Strand=Plus/Plus
Query 43006 TGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCT 43065
|||| || | ||| || || |||| || |||||||| |||||||| || | ||||| |
Sbjct 38421 TGTAGTCGGACAGGGTTCGTCCGTCCTCAAGCTGCTTTCCAGCGAAAATCAAACGCTGTT 38480
Query 43066 GGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGT-TTGAGCGTCGCC-ACCGTGTC 43123
|||| | || | || |||||||||| ||| | || | |||| ||| | | | |||||
Sbjct 38481 GGTCTGGAGGAATGCCCTCCTTGTCC-TGAATCTTGGACTTGA-CGTTGTCGATGGTGTC 38538
Query 43124 GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
|| || || || | |||||||| ||||| || || ||||| || |||||||||||
Sbjct 38539 TGAGGACTCGACCTCCAGAGTGATGGTCTTGCCGGTAAGGGTCTTAACGAAGATTTGCAT 38598
Query 43184 T 43184
|
Sbjct 38599 T 38599
>seq1
Length=3245857
Score = 89.7 bits (98), Expect = 6e-13
Identities = 137/193 (71%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 42971 CAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTC 43030
|||||||| || | || |||||| || || ||||| || | ||||| || | ||
Sbjct 3091568 CAACACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTACGTCCATC 3091509
Query 43031 ATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 43090
|| ||||| |||||||| || ||||| ||||| ||||| | || | | |||||||||
Sbjct 3091508 CTCGAGCTGTTTACCAGCAAAGATGAGACGCTGTTGGTCTGGGGGGATACCCTCCTTGTC 3091449
Query 43091 CATGATTTTTTGTTTGAGCGTCGCC-ACCGTGTCGCTCGATTCCACATCGACCGTGATGG 43149
| ||| || |||| ||| | | | ||||| || || || |||| |||||||
Sbjct 3091448 CTGGATCTTGGACTTGA-CGTTGTCGATGGTGTCCGAAGACTCAACCTCGAGGGTGATGG 3091390
Query 43150 TTTTGCCCGTTAG 43162
|||||||||| ||
Sbjct 3091389 TTTTGCCCGTAAG 3091377
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 571817185432240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |