Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeotremella_20skinneri_20[genbank_20GCA_5F001599695.1_202016-03- 01] 58 sequences; 20,788,256 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq15 102 5e-17 seq1 87.8 1e-12 >seq15 Length=579413 Score = 102 bits (112), Expect = 5e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || || || | ||| || || || | ||| || ||||| || |||||||| ||| Sbjct 37868 CCACCACGGAGACGCAGGACAAGATGAAGTGTAGACTCCTTCTGGATATTGTAGTCCGAC 37927 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 | || | || |||||||||||||| ||||| || || ||||||||||| ||| Sbjct 37928 AAAGTGCGCCCATCCTCCAACTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGG 37987 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGAC 34341 | | ||||||||| || ||| | ||| | || | |||| | ||| | || || || Sbjct 37988 ATACCCTCCTTGTCCTGGAT-TTTGGATTTCACATTGTCTATGGTATCCGAAGACTCCAC 38046 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | || ||||| || ||||| ||||| || || ||||||||||| Sbjct 38047 CTCAAGAGTAATGGTCTTTCCGGTAAGAGTCTTGACGAAGATCTGCAT 38094 Score = 93.3 bits (102), Expect = 3e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 |||||||| || |||||||| || || ||| |||| |||| |||||| || ||||| Sbjct 38132 TCTTTCTGGATATTGTAGTCCGAGAGGGTTCGGCCGTCTTCCAGCTGCTTTCCGGCGAAG 38191 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318 || || ||||| ||||| ||| | | ||| ||||| ||||| || | || | Sbjct 38192 ATCAGACGCTGTTGGTCTGGGGGGATACCCTCTTTGTCCTGAATCTTCGATTTCACATTG 38251 Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378 | || | || | || || || || | |||||||| || ||||| ||||| || || Sbjct 38252 TCGATGGTGTCAGAAGACTCAACCTCAAGAGTGATGGTCTTTCCGGTAAGAGTCTTGACG 38311 Query 34379 AAGATCTGCAT 34389 ||||||||||| Sbjct 38312 AAGATCTGCAT 38322 Score = 87.8 bits (96), Expect = 1e-12 Identities = 126/178 (71%), Gaps = 0/178 (0%) Strand=Plus/Plus Query 34212 TGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCT 34271 ||||||||||||| || |||| || | |||||| || |||||||| | ||||| | Sbjct 38421 TGTAGTCGGACAGGGTTCGTCCGTCCTCAAGCTGCTTTCCAGCGAAAATCAAACGCTGTT 38480 Query 34272 GGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGG 34331 |||| || | || ||||||||| ||||| ||| | | | | || | || | Sbjct 38481 GGTCTGGAGGAATGCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCGATGGTGTCTG 38540 Query 34332 TCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || ||||| |||| |||||||| |||||||| || || || || ||||| ||||| Sbjct 38541 AGGACTCGACCTCCAGAGTGATGGTCTTGCCGGTAAGGGTCTTAACGAAGATTTGCAT 38598 Score = 86.0 bits (94), Expect = 4e-12 Identities = 143/207 (69%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 34162 TCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGA 34221 ||| || || || | || || ||||||| |||| |||||| || ||||||||||| || Sbjct 37582 TCCACCACGAAGACGGAGGACAAGGTGTAGAGTAGATTCTTTTTGGATGTTGTAGTCCGA 37641 Query 34222 CAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGG 34281 || | | || ||||||||||| || || || || | || ||| ||||| ||| Sbjct 37642 AAGAGTCCTTCCATCCTCCAACTGCTTCCCGGCAAAGATCAACCTCTGTTGGTCTGGGGG 37701 Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGAC 34341 | || ||||||||| || || ||| | | | | || | ||| | |||||| || Sbjct 37702 AATGCCCTCCTTGTCCTGGATTTTCGACTTCACGTTGTCGATGGTATCAGACGATTCAAC 37761 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAG 34368 |||| |||||||| || || || || Sbjct 37762 CTCCAGTGTGATGGTCTTTCCCGTTAG 37788 >seq1 Length=3245857 Score = 87.8 bits (96), Expect = 1e-12 Identities = 143/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || |||| ||||| ||||||||| | ||| || ||||| |||||||||||||| Sbjct 3091582 CCACCACGCAACCTCAACACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAG 3091523 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| | || || | ||| || || || || ||||| ||||| ||||| ||| Sbjct 3091522 AGAGTACGTCCATCCTCGAGCTGTTTACCAGCAAAGATGAGACGCTGTTGGTCTGGGGGG 3091463 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | | ||||||||| ||||| ||| | | | | || | || | || || || Sbjct 3091462 ATACCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCCGAAGACTCAACC 3091403 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAG 34368 || | |||||||||||||| || || Sbjct 3091402 TCGAGGGTGATGGTTTTGCCCGTAAG 3091377 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323071771628480