Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phaeotremella_20skinneri_20[genbank_20GCA_5F001599695.1_202016-03-
01] 58 sequences; 20,788,256 total letters
Query= NC_002687.1
Length=335593
Score E
Sequences producing significant alignments: (Bits) Value
seq5 138 2e-27
>seq5
Length=1078720
Score = 138 bits (152), Expect = 2e-27
Identities = 324/485 (67%), Gaps = 17/485 (4%)
Strand=Plus/Plus
Query 249003 GCTCTTCAACGCCGGTAC-CGTCAACAATCAGCTGAGCTCGTGCTTTCTTCTTGCCATGC 249061
||| |||||||| ||||| | ||| | |||| || || || || || | |||||||
Sbjct 587223 GCTTTTCAACGCTGGTACTCCTCA-CGCTCAGATGTCTTCATGTTTCCTCGTCGCCATGC 587281
Query 249062 AAGACGACTCTGTCGACGGCATTTATGACACGCTTAAACAGACG---GCGAAGATTTCTA 249118
|| |||||| | || ||||| || ||||| || || ||| || |||| || |
Sbjct 587282 GGGATGACTCTATTGAGGGCATCTACGACACTCTCAA---GACCTGTGCTCAGATCTCCA 587338
Query 249119 AATTCGCGGGCGGAATCGGTCTCTCCGTCTCCAACATCCGAGCGAAGGGTTCGTACATCA 249178
| ||| || || || |||||| | || ||||||||| || |||||||| |||||
Sbjct 587339 AGACCGCCGGTGGTATTGGTCTCCACATCCACAACATCCGTGCCAAGGGTTCATACATTG 587398
Query 249179 AAGGTACAAATGGGGTCAGTGATGGTATCGTACCCCTCCTTCGATGCTTTGAGTCCACCG 249238
|| || || || | | | |||||||| ||| | || ||| |||||| |||| |
Sbjct 587399 CCGGCACCAACGGCTACTCTAACGGTATCGTCCCCATGCTGCGAGCCTTTGACGCCACAG 587458
Query 249239 CCAGGTTCATCAACCAGGCCGG------GCGCCGAAAGGGGTCGTTCGCCATGTATTTGG 249292
| | | | || |||| | || ||||| || | || ||||| || | |
Sbjct 587459 CTCGTTACGTCGACCAAGGTGGTAACAAGCGCCCC---GGTGCCTTTGCCATCTACCTTG 587515
Query 249293 AAGTGTGGCACGCCGATATATTGGAGTTCCTGGACTTGAAAAAGAACAACGGCAACGAGC 249352
| ||||| |||||| | || || |||||||||||| |||||| |||| || |||
Sbjct 587516 AGCCTTGGCATGCCGATGTCTTCGACTTCCTGGACTTGCGTAAGAACCACGGAAAAGAGG 587575
Query 249353 TCATGAGAGCGCGTGACCTCTTCTACGGCCTGTGGGTCTCCGACTTGTTCATGCGCCGCG 249412
| |||| | ||| | ||||||| ||| ||| | |||| | |||||| || |
Sbjct 587576 AAGTCCGAGCAAGAGACTTGTTCTACGCCCTTTGGATTCCCGATCTCTTCATGAAGCGTG 587635
Query 249413 TCAAGGCCGACGGCGATTGGACGCTTCTTTCTCCGTCCGACGCCCCGGACCTCATCGATC 249472
|| | |||||||||| ||||| || | | |||| |||| ||| | |||| ||||
Sbjct 587636 TCGAATCCGACGGCGACTGGACTCTGATGTGTCCGGCCGAGTGCCCAGGCCTCGCCGATG 587695
Query 249473 TACAC 249477
| |||
Sbjct 587696 TCCAC 587700
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1073765602057344
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |