Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeotremella_20skinneri_20[genbank_20GCA_5F001599695.1_202016-03- 01] 58 sequences; 20,788,256 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq5 138 2e-27 >seq5 Length=1078720 Score = 138 bits (152), Expect = 2e-27 Identities = 324/485 (67%), Gaps = 17/485 (4%) Strand=Plus/Plus Query 249003 GCTCTTCAACGCCGGTAC-CGTCAACAATCAGCTGAGCTCGTGCTTTCTTCTTGCCATGC 249061 ||| |||||||| ||||| | ||| | |||| || || || || || | ||||||| Sbjct 587223 GCTTTTCAACGCTGGTACTCCTCA-CGCTCAGATGTCTTCATGTTTCCTCGTCGCCATGC 587281 Query 249062 AAGACGACTCTGTCGACGGCATTTATGACACGCTTAAACAGACG---GCGAAGATTTCTA 249118 || |||||| | || ||||| || ||||| || || ||| || |||| || | Sbjct 587282 GGGATGACTCTATTGAGGGCATCTACGACACTCTCAA---GACCTGTGCTCAGATCTCCA 587338 Query 249119 AATTCGCGGGCGGAATCGGTCTCTCCGTCTCCAACATCCGAGCGAAGGGTTCGTACATCA 249178 | ||| || || || |||||| | || ||||||||| || |||||||| ||||| Sbjct 587339 AGACCGCCGGTGGTATTGGTCTCCACATCCACAACATCCGTGCCAAGGGTTCATACATTG 587398 Query 249179 AAGGTACAAATGGGGTCAGTGATGGTATCGTACCCCTCCTTCGATGCTTTGAGTCCACCG 249238 || || || || | | | |||||||| ||| | || ||| |||||| |||| | Sbjct 587399 CCGGCACCAACGGCTACTCTAACGGTATCGTCCCCATGCTGCGAGCCTTTGACGCCACAG 587458 Query 249239 CCAGGTTCATCAACCAGGCCGG------GCGCCGAAAGGGGTCGTTCGCCATGTATTTGG 249292 | | | | || |||| | || ||||| || | || ||||| || | | Sbjct 587459 CTCGTTACGTCGACCAAGGTGGTAACAAGCGCCCC---GGTGCCTTTGCCATCTACCTTG 587515 Query 249293 AAGTGTGGCACGCCGATATATTGGAGTTCCTGGACTTGAAAAAGAACAACGGCAACGAGC 249352 | ||||| |||||| | || || |||||||||||| |||||| |||| || ||| Sbjct 587516 AGCCTTGGCATGCCGATGTCTTCGACTTCCTGGACTTGCGTAAGAACCACGGAAAAGAGG 587575 Query 249353 TCATGAGAGCGCGTGACCTCTTCTACGGCCTGTGGGTCTCCGACTTGTTCATGCGCCGCG 249412 | |||| | ||| | ||||||| ||| ||| | |||| | |||||| || | Sbjct 587576 AAGTCCGAGCAAGAGACTTGTTCTACGCCCTTTGGATTCCCGATCTCTTCATGAAGCGTG 587635 Query 249413 TCAAGGCCGACGGCGATTGGACGCTTCTTTCTCCGTCCGACGCCCCGGACCTCATCGATC 249472 || | |||||||||| ||||| || | | |||| |||| ||| | |||| |||| Sbjct 587636 TCGAATCCGACGGCGACTGGACTCTGATGTGTCCGGCCGAGTGCCCAGGCCTCGCCGATG 587695 Query 249473 TACAC 249477 | ||| Sbjct 587696 TCCAC 587700 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073765602057344