Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeotremella_20skinneri_20[genbank_20GCA_5F001599695.1_202016-03- 01] 58 sequences; 20,788,256 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq5 201 1e-46 seq15 111 1e-19 seq4 102 7e-17 >seq5 Length=1078720 Score = 201 bits (222), Expect = 1e-46 Identities = 474/708 (67%), Gaps = 11/708 (2%) Strand=Plus/Minus Query 23031 CAAGATTGCATACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGAT 23090 |||| ||||| || || ||||| || || | |||||| | ||||||||||| | | Sbjct 587949 CAAG-TTGCAAACAGCGACCTCATCAGGGGCGGAGTACTCAATGATTTCGGTACACAAGT 587891 Query 23091 TGCTACACTTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGT 23150 | || | || || || || | || ||||||| || |||| | |||||||| Sbjct 587890 TACTCGATTTGATAGTACCGAGATGTTGCTGGTTGGACTTGGCATTGGCAGCATCCTTGT 587831 Query 23151 AGAGCATGTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATAGTCT 23210 | |||||| | || | || |||||| || | ||||| ||| || ||| | ||| Sbjct 587830 AAAGCATGAAGGGGTTACCGGTCTCGGTTTGAGCCTCGAGGATGGCAAACCAAAGTTTCT 587771 Query 23211 GAGCGTGAACA--CGT-CG-CACGTACCTGCCTTCTTCCTCGTACTTTTGGTACAACGCG 23266 | || | | | | || | | |||| ||||||| ||||| | ||| | | Sbjct 587770 GGGCTTTGATGGTCTTGCGACCCTTACCGGCCTTCT----CGTACGACTCGTAGAGCTTT 587715 Query 23267 TCAAATTCGGCACCGTA-ACAGTCGGCCAGGCCGGGCGATTGCATCGGACACATGAGACT 23325 ||||| || | || ||| ||||| ||||| || | | ||||||||| ||| | Sbjct 587714 TCAAACTCTTCGGAGTGGACA-TCGGCGAGGCCTGGGCACTCGGCCGGACACATCAGAGT 587656 Query 23326 CCACATTGAGTCATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAA 23385 ||| ||| ||| || || |||| || ||||| || ||||| || |||||||| Sbjct 587655 CCAGTCGCCGTCGGATTCGACACGCTTCATGAAGAGATCGGGAATCCAAAGGGCGTAGAA 587596 Query 23386 CAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAA 23445 || || | || || || |||||||| ||| |||||| ||| |||| ||||| || Sbjct 587595 CAAGTCTCTTGCTCGGACTTCCTCTTTTCCGTGGTTCTTACGCAAGTCCAGGAAGTCGAA 587536 Query 23446 CACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCC 23505 || || |||||||| ||||| ||||| | |||||| || || || | ||| || || || Sbjct 587535 GACATCGGCATGCCAAGGCTCAAGGTAGATGGCAAAGGCACCGGGGCGCTTGTTACCACC 587476 Query 23506 CTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGA 23565 || ||||||||||| || ||| || | ||| ||||| || |||| |||||| || Sbjct 587475 TTGGTCGACGTAACGAGCTGTGGCGTCAAAGGCTCGCAGCATGGGGACGATACCGTTAGA 587416 Query 23566 CGCGCCGCCTACGCCCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACC 23625 |||| ||| || | ||||| || || || | |||||| | ||||| ||| Sbjct 587415 GTAGCCGTTGGTGCCGGCAATGTATGAACCCTTGGCACGGATGTTGTGGATGTGGAGACC 587356 Query 23626 TATGCCTCCGCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTC 23685 || || ||| | | || || ||| || || || |||||||||||||||||||| Sbjct 587355 AATACCACCGGCGGTCTTGGAGATCTGAGCACAGGTCTTGAGAGTGTCGTAGATGCCCTC 587296 Query 23686 GATGCTGTCCTCTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGC 23733 || ||| || | ||||| | |||||| |||||||| || || Sbjct 587295 AATAGAGTCATCCCGCATGGCGACGAGGAAACATGAAGACATCTGAGC 587248 >seq15 Length=579413 Score = 111 bits (122), Expect = 1e-19 Identities = 221/323 (68%), Gaps = 6/323 (2%) Strand=Plus/Plus Query 57807 GAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGACAACGAC 57866 || ||| | || || || | || || || || ||||| || ||| | |||||| || | Sbjct 218255 GAGAACATCCACTCTGAGACCTACTCCCTCCTGATCGACACCTACATCAAGGACCCCGCC 218314 Query 57867 -GAGAAACGTAGACTGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAGAAGGCAGA 57925 | || || || ||| | || ||||| || || ||| || |||||||| || | Sbjct 218315 CGCCGGACTTAC-CTCTTCGAAGCCATCGACACCATCCCCTGCATTGCCAAGAAAGCCAA 218373 Query 57926 GTGGTCAATCAAATGGATAAA--AAGCGCCACGGCCACGTTCGCCGAGAGGCTAATCGCG 57983 ||| | |||| ||||| | | || | | || || ||||| | |||||||| Sbjct 218374 CTGGGCTCTCAAGTGGATCTCTGATGAGCGATCG--ACCTTTGCCGAACGACTAATCGCC 218431 Query 57984 TTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATGAAG 58043 || |||||||| || ||||| ||||| || || ||| || | || || ||| ||||| Sbjct 218432 TTTGCCGCCGTTGAGGGTATCTTCTTCTCCGGTTCCTTCGCTTCCATCTTCTGGCTGAAG 218491 Query 58044 AAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAGGGT 58103 || || || || |||||||| |||| || ||||||| | || || || ||||||||| Sbjct 218492 AAGCGTGGTCTCATGCCCGGATTGACCTTCTCCAACGAGCTCATCTCCCGAGACGAGGGT 218551 Query 58104 CTCCATACTGATTTTGCGTGCCT 58126 || || || || || || || || Sbjct 218552 CTGCACACCGACTTCGCATGTCT 218574 >seq4 Length=1370089 Score = 102 bits (112), Expect = 7e-17 Identities = 116/155 (75%), Gaps = 2/155 (1%) Strand=Plus/Plus Query 57975 CTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTT 58034 || || ||||| || || ||||| || || ||||||||||| |||||||| ||||| Sbjct 447511 CTCATTGCGTTTGCAGCAGTCGAGGGGATCTTCTTTTCGGGGTCGTTTGCGGCTATATTC 447570 Query 58035 TGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGC 58094 ||| ||||||| || || ||||||| || |||||||| ||||||||||| ||| Sbjct 447571 TGGTTGAAGAAGCGAGGATTGATGCCTGGTTTGACGTTTTCGAACGAGTTGATCAGTCGC 447630 Query 58095 GACGAGGGTCTCCATAC--TGATTTTGCGTGCCTA 58127 |||||||| ||||| ||| ||| |||||| Sbjct 447631 GACGAGGGGACGCATACGGTGAGTTTTGATGCCTA 447665 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445766076819360