Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phaeotremella_20skinneri_20[genbank_20GCA_5F001599695.1_202016-03-
01] 58 sequences; 20,788,256 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq15 136 5e-27
seq5 109 7e-19
seq4 91.5 2e-13
>seq15
Length=579413
Score = 136 bits (150), Expect = 5e-27
Identities = 181/249 (73%), Gaps = 3/249 (1%)
Strand=Plus/Minus
Query 33581 ACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAG 33640
||||||||| ||| ||||||||||||||||| || | ||||| || || || |
Sbjct 218572 ACATGCGAAGTCGGTGTGCAGACCCTCGTCTCGGGAGATGAGCTCGTTGGAGAAGGTCAA 218513
Query 33641 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAA 33700
||||||||| || |||||||| || ||||| || ||||||||||| || ||||| |||||
Sbjct 218512 TCCGGGCATGAGACCACGCTTCTTCAGCCAGAAGATGGAAGCGAAGGAACCGGAGAAGAA 218453
Query 33701 GATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATA--ACCGGCGCT-GTCATG 33757
||| || || || || |||||||| || |||| || || | | |||| |||
Sbjct 218452 GATACCCTCAACGGCGGCAAAGGCGATTAGTCGTTCGGCAAAGGTCGATCGCTCATCAGA 218393
Query 33758 TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATT 33817
|||||||| ||||||| | ||| ||||| | || || || || || ||||| |
Sbjct 218392 GATCCACTTGAGAGCCCAGTTGGCTTTCTTGGCAATGCAGGGGATGGTGTCGATGGCTTC 218333
Query 33818 AAAGAGATA 33826
||||| ||
Sbjct 218332 GAAGAGGTA 218324
>seq5
Length=1078720
Score = 109 bits (120), Expect = 7e-19
Identities = 455/720 (63%), Gaps = 46/720 (6%)
Strand=Plus/Minus
Query 63232 CCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAA 63291
|||||||||||| | ||| || ||||| | || || ||||| |||||||| ||||
Sbjct 587671 CCGGACACATCAGAGTCCAGTCGCCGTCGGATTCGACACGCTTCATGAAGAGATCGGGAA 587612
Query 63292 TCCAAAGAGC-TATAAATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTA 63350
||||||| || || || || ||||||| || |||||| ||||| |||||
Sbjct 587611 TCCAAAGGGCGTAGAACAAG-TCTCTTGCTCGGACTTCCTCTTTTCCGTGGTTCTTACGC 587553
Query 63351 AGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCA 63410
| || ||||| | | | ||| | |||||| || || | ||| ||||| | | ||
Sbjct 587552 AAGTCCAGGAAGTCGAAGACATCGGCATGCCAAGGCTCAAGGTAGATGGCAAAGGCACCG 587493
Query 63411 GGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATT 63470
|| || ||||| || || || || | ||| | ||| ||| | | | ||| || |||
Sbjct 587492 GGGCGCTTGTTACCACCTTGGTCGACGTAACGAGCTGTGGCGTCAAAGGCTCGCAGCATG 587433
Query 63471 GGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATA 63530
|| | |||||||| || || ||||| |||| || || || ||||||| ||
Sbjct 587432 GGGACGATACCGTTAGAGTAGCCGTTGGTGCCGGCAATGTATGAACCCTTGGCACGGATG 587373
Query 63531 TTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAAC 63590
|| || ||||| || || || || | || ||||| || || || |
Sbjct 587372 TTGTGGATGTGGAGACCAATACCACCGGCGGTCTTGGAGATCTGAGCACAGGTCTTGAGA 587313
Query 63591 GTGTCATAGATGCCTTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATT 63650
||||| |||||||| || || ||||| |||| | || ||||| ||||||
Sbjct 587312 GTGTCGTAGATGCCCTCAATAGAGTCATCCCGCATGGCGACGAGGAAACATGAAGACATC 587253
Query 63651 TG---GTGACGAGTA-----GTT-------------CCCGCATTAAAT------------ 63677
|| |||| ||||| ||| | || | |||
Sbjct 587252 TGAGCGTGAGGAGTACCAGCGTTGAAAAGCTAATTATCAGCTTGGAATACTGGTTTTTCA 587193
Query 63678 ---AAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATA 63734
| || || |||||||| || || | ||||| | || ||||| ||||||||
Sbjct 587192 CTCACAGTTGGGGAAGCGTGAGTGAAGTAACGCTCAGACATGAGGTTGTAGGTCTCAATG 587133
Query 63735 GCTGAGTCTATAT----CCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTG 63790
|| ||| || | || | |||| || || ||||||||||| | |||||||||
Sbjct 587132 ACTTTGTCAATGTTGGCGCCGTGGATG----CCGACAGCGACACGCATGATCATGTGCTG 587077
Query 63791 AGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAA 63850
||||| ||| || || ||| ||| || | || ||| ||| || | ||| || ||
Sbjct 587076 AGGTCGTTCGACGATCTTGCCGTTGATGCGGAGCAGGTACGATCGCTCAAGAGTCTTGAA 587017
Query 63851 ACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGCTTATCCTT 63910
||| || |||||||| | ||||| || ||||| || || | || | ||| ||||||
Sbjct 587016 ACCGAAGTAGTTGTAAGCGAAGTCACGGTCGTAGATGATGGCTGAGTCGAGAGCATCCTT 586957
>seq4
Length=1370089
Score = 91.5 bits (100), Expect = 2e-13
Identities = 97/128 (76%), Gaps = 0/128 (0%)
Strand=Plus/Minus
Query 33603 CCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCATTAGGCCACGCTTT 33662
|||||||| | ||| || || ||||| |||||||| | || ||||| | || |||||
Sbjct 447638 CCCTCGTCGCGACTGATCAACTCGTTCGAAAACGTCAAACCAGGCATCAATCCTCGCTTC 447579
Query 33663 TTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTCTACTGCAGCAAAG 33722
|| | ||| ||||| | || || || || ||||||||||| || || ||||| |||||
Sbjct 447578 TTCAACCAGAATATAGCCGCAAACGACCCCGAAAAGAAGATCCCCTCGACTGCTGCAAAC 447519
Query 33723 GCAATAAG 33730
||||| ||
Sbjct 447518 GCAATGAG 447511
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629817143382240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |