Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeotremella_20skinneri_20[genbank_20GCA_5F001599695.1_202016-03- 01] 58 sequences; 20,788,256 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq15 136 5e-27 seq5 109 7e-19 seq4 91.5 2e-13 >seq15 Length=579413 Score = 136 bits (150), Expect = 5e-27 Identities = 181/249 (73%), Gaps = 3/249 (1%) Strand=Plus/Minus Query 33581 ACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAG 33640 ||||||||| ||| ||||||||||||||||| || | ||||| || || || | Sbjct 218572 ACATGCGAAGTCGGTGTGCAGACCCTCGTCTCGGGAGATGAGCTCGTTGGAGAAGGTCAA 218513 Query 33641 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAA 33700 ||||||||| || |||||||| || ||||| || ||||||||||| || ||||| ||||| Sbjct 218512 TCCGGGCATGAGACCACGCTTCTTCAGCCAGAAGATGGAAGCGAAGGAACCGGAGAAGAA 218453 Query 33701 GATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATA--ACCGGCGCT-GTCATG 33757 ||| || || || || |||||||| || |||| || || | | |||| ||| Sbjct 218452 GATACCCTCAACGGCGGCAAAGGCGATTAGTCGTTCGGCAAAGGTCGATCGCTCATCAGA 218393 Query 33758 TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATT 33817 |||||||| ||||||| | ||| ||||| | || || || || || ||||| | Sbjct 218392 GATCCACTTGAGAGCCCAGTTGGCTTTCTTGGCAATGCAGGGGATGGTGTCGATGGCTTC 218333 Query 33818 AAAGAGATA 33826 ||||| || Sbjct 218332 GAAGAGGTA 218324 >seq5 Length=1078720 Score = 109 bits (120), Expect = 7e-19 Identities = 455/720 (63%), Gaps = 46/720 (6%) Strand=Plus/Minus Query 63232 CCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAA 63291 |||||||||||| | ||| || ||||| | || || ||||| |||||||| |||| Sbjct 587671 CCGGACACATCAGAGTCCAGTCGCCGTCGGATTCGACACGCTTCATGAAGAGATCGGGAA 587612 Query 63292 TCCAAAGAGC-TATAAATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTA 63350 ||||||| || || || || ||||||| || |||||| ||||| ||||| Sbjct 587611 TCCAAAGGGCGTAGAACAAG-TCTCTTGCTCGGACTTCCTCTTTTCCGTGGTTCTTACGC 587553 Query 63351 AGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCA 63410 | || ||||| | | | ||| | |||||| || || | ||| ||||| | | || Sbjct 587552 AAGTCCAGGAAGTCGAAGACATCGGCATGCCAAGGCTCAAGGTAGATGGCAAAGGCACCG 587493 Query 63411 GGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATT 63470 || || ||||| || || || || | ||| | ||| ||| | | | ||| || ||| Sbjct 587492 GGGCGCTTGTTACCACCTTGGTCGACGTAACGAGCTGTGGCGTCAAAGGCTCGCAGCATG 587433 Query 63471 GGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATA 63530 || | |||||||| || || ||||| |||| || || || ||||||| || Sbjct 587432 GGGACGATACCGTTAGAGTAGCCGTTGGTGCCGGCAATGTATGAACCCTTGGCACGGATG 587373 Query 63531 TTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAAC 63590 || || ||||| || || || || | || ||||| || || || | Sbjct 587372 TTGTGGATGTGGAGACCAATACCACCGGCGGTCTTGGAGATCTGAGCACAGGTCTTGAGA 587313 Query 63591 GTGTCATAGATGCCTTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATT 63650 ||||| |||||||| || || ||||| |||| | || ||||| |||||| Sbjct 587312 GTGTCGTAGATGCCCTCAATAGAGTCATCCCGCATGGCGACGAGGAAACATGAAGACATC 587253 Query 63651 TG---GTGACGAGTA-----GTT-------------CCCGCATTAAAT------------ 63677 || |||| ||||| ||| | || | ||| Sbjct 587252 TGAGCGTGAGGAGTACCAGCGTTGAAAAGCTAATTATCAGCTTGGAATACTGGTTTTTCA 587193 Query 63678 ---AAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATA 63734 | || || |||||||| || || | ||||| | || ||||| |||||||| Sbjct 587192 CTCACAGTTGGGGAAGCGTGAGTGAAGTAACGCTCAGACATGAGGTTGTAGGTCTCAATG 587133 Query 63735 GCTGAGTCTATAT----CCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTG 63790 || ||| || | || | |||| || || ||||||||||| | ||||||||| Sbjct 587132 ACTTTGTCAATGTTGGCGCCGTGGATG----CCGACAGCGACACGCATGATCATGTGCTG 587077 Query 63791 AGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAA 63850 ||||| ||| || || ||| ||| || | || ||| ||| || | ||| || || Sbjct 587076 AGGTCGTTCGACGATCTTGCCGTTGATGCGGAGCAGGTACGATCGCTCAAGAGTCTTGAA 587017 Query 63851 ACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGCTTATCCTT 63910 ||| || |||||||| | ||||| || ||||| || || | || | ||| |||||| Sbjct 587016 ACCGAAGTAGTTGTAAGCGAAGTCACGGTCGTAGATGATGGCTGAGTCGAGAGCATCCTT 586957 >seq4 Length=1370089 Score = 91.5 bits (100), Expect = 2e-13 Identities = 97/128 (76%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 33603 CCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCATTAGGCCACGCTTT 33662 |||||||| | ||| || || ||||| |||||||| | || ||||| | || ||||| Sbjct 447638 CCCTCGTCGCGACTGATCAACTCGTTCGAAAACGTCAAACCAGGCATCAATCCTCGCTTC 447579 Query 33663 TTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTCTACTGCAGCAAAG 33722 || | ||| ||||| | || || || || ||||||||||| || || ||||| ||||| Sbjct 447578 TTCAACCAGAATATAGCCGCAAACGACCCCGAAAAGAAGATCCCCTCGACTGCTGCAAAC 447519 Query 33723 GCAATAAG 33730 ||||| || Sbjct 447518 GCAATGAG 447511 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629817143382240