Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeotremella_20skinneri_20[genbank_20GCA_5F001599695.1_202016-03- 01] 58 sequences; 20,788,256 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq5 114 2e-20 seq15 113 6e-20 >seq5 Length=1078720 Score = 114 bits (126), Expect = 2e-20 Identities = 466/733 (64%), Gaps = 46/733 (6%) Strand=Plus/Minus Query 66012 CCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATA 66071 || || || || |||||||||||| | ||| || ||||| | || || ||||| Sbjct 587684 CCTGGGCACTCGGCCGGACACATCAGAGTCCAGTCGCCGTCGGATTCGACACGCTTCATG 587625 Query 66072 AAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCTATGTTCCTCGTTTCCT 66131 |||||||| ||||||||||| || || || ||||| | || |||||| ||||| Sbjct 587624 AAGAGATCGGGAATCCAAAGGGCGTAGAACAAGTCTCTTGCTCGGACTTCCTCTTTTCCG 587565 Query 66132 GTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCACGGTTCCAAGTATATG 66191 ||||| | || ||||| | | | ||| |||||| || || | ||| ||| Sbjct 587564 TGGTTCTTACGCAAGTCCAGGAAGTCGAAGACATCGGCATGCCAAGGCTCAAGGTAGATG 587505 Query 66192 GCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAA 66251 || | | || || || ||||| || || || || | ||| | ||| ||| | | | Sbjct 587504 GCAAAGGCACCGGGGCGCTTGTTACCACCTTGGTCGACGTAACGAGCTGTGGCGTCAAAG 587445 Query 66252 ACTCTCAACATTGGAATAATACCATTGGATGTA-CCATTGGTCCCGGAGATATAGCTTCC 66310 ||| || ||| || | ||||| || || ||| || ||||| |||| || || || Sbjct 587444 GCTCGCAGCATGGGGACGATACCGTTAGA-GTAGCCGTTGGTGCCGGCAATGTATGAACC 587386 Query 66311 ACTTGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGC 66370 | ||||| || || || ||||| || || || || | || ||||| || Sbjct 587385 CTTGGCACGGATGTTGTGGATGTGGAGACCAATACCACCGGCGGTCTTGGAGATCTGAGC 587326 Query 66371 GCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAA 66430 || || | || || ||||||||||| ||| |||||| |||| | || || Sbjct 587325 ACAGGTCTTGAGAGTGTCGTAGATGCCCTCAATAGAGTCATCCCGCATGGCGACGAGGAA 587266 Query 66431 ACAGCTAGACATTTG---GTGACGACTA-----GTTCCC--GC--ATTA---------AA 66469 ||| |||||| || |||| || || ||| || |||| || Sbjct 587265 ACATGAAGACATCTGAGCGTGAGGAGTACCAGCGTTGAAAAGCTAATTATCAGCTTGGAA 587206 Query 66470 TAAGG---------------TAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATT 66514 || | | || |||||||| || || | ||||| | || || Sbjct 587205 TACTGGTTTTTCACTCACAGTTGGGGAAGCGTGAGTGAAGTAACGCTCAGACATGAGGTT 587146 Query 66515 GTACGTCTCAATAGCTGAGTCTATATC----CCATTGATGAATTCCTACTGCGACACGCA 66570 ||| |||||||| || ||| || | || | |||| || || |||||||||| Sbjct 587145 GTAGGTCTCAATGACTTTGTCAATGTTGGCGCCGTGGATG----CCGACAGCGACACGCA 587090 Query 66571 TTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTT 66630 | | |||||||||||||| ||| ||||||||| ||| || | || ||| ||| | Sbjct 587089 TGATCATGTGCTGAGGTCGTTCGACGATCTTGCCGTTGATGCGGAGCAGGTACGATCGCT 587030 Query 66631 CCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGT 66690 | | ||| || ||||| || |||||||| | ||||| || ||||| || || | |||| Sbjct 587029 CAAGAGTCTTGAAACCGAAGTAGTTGTAAGCGAAGTCACGGTCGTAGATGATGGCTGAGT 586970 Query 66691 TGAGTTTATCCTT 66703 ||| |||||| Sbjct 586969 CGAGAGCATCCTT 586957 >seq15 Length=579413 Score = 113 bits (124), Expect = 6e-20 Identities = 116/152 (76%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 36157 ACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAG 36216 ||||||||| ||| ||| ||||||||||||| || | |||||||| || || | Sbjct 218572 ACATGCGAAGTCGGTGTGCAGACCCTCGTCTCGGGAGATGAGCTCGTTGGAGAAGGTCAA 218513 Query 36217 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAA 36276 ||||||||| || |||||||| || ||||| || ||||| || || || || || ||||| Sbjct 218512 TCCGGGCATGAGACCACGCTTCTTCAGCCAGAAGATGGAAGCGAAGGAACCGGAGAAGAA 218453 Query 36277 AATTCCTTCTACTGCCGCAAAGGCAATAAGTC 36308 || || || || || |||||||| || |||| Sbjct 218452 GATACCCTCAACGGCGGCAAAGGCGATTAGTC 218421 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658172322824720