Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeotremella_20skinneri_20[genbank_20GCA_5F001599695.1_202016-03- 01] 58 sequences; 20,788,256 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq4 100 2e-16 seq15 95.1 9e-15 >seq4 Length=1370089 Score = 100 bits (110), Expect = 2e-16 Identities = 103/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 22737 AACACGTCTCTTGGCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGC 22796 ||| || ||| | || ||||| || || || || || | ||||| ||||| |||||||| Sbjct 447504 AACTCGCCTCATTGCGTTTGCAGCAGTCGAGGGGATCTTCTTTTCGGGGTCGTTTGCGGC 447563 Query 22797 CATATTCTGGCTGAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGAT 22856 ||||||||| ||||||| || | ||||| || ||| ||||||| ||||||||||| Sbjct 447564 TATATTCTGGTTGAAGAAGCGAGGATTGATGCCTGGTTTGACGTTTTCGAACGAGTTGAT 447623 Query 22857 TAGCCGTGACGAAGG 22871 || || ||||| || Sbjct 447624 CAGTCGCGACGAGGG 447638 >seq15 Length=579413 Score = 95.1 bits (104), Expect = 9e-15 Identities = 112/152 (74%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 22750 GCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATATTCTGGCTG 22809 |||||||| || ||||| || || | || || || || || || |||| ||||||||| Sbjct 218429 GCCTTTGCCGCCGTTGAGGGTATCTTCTTCTCCGGTTCCTTCGCTTCCATCTTCTGGCTG 218488 Query 22810 AAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGCCGTGACGAA 22869 ||||| ||| |||||||| || ||| | || ||||||||| | || ||| ||||| Sbjct 218489 AAGAAGCGTGGTCTCATGCCCGGATTGACCTTCTCCAACGAGCTCATCTCCCGAGACGAG 218548 Query 22870 GGTCTACACTGTGACTTTGCTTGTATGCTGTT 22901 ||||| ||| ||||| || ||| | || || Sbjct 218549 GGTCTGCACACCGACTTCGCATGTCTCCTATT 218580 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356233348187374