Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeotremella_20skinneri_20[genbank_20GCA_5F001599695.1_202016-03- 01] 58 sequences; 20,788,256 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq15 136 6e-27 seq5 104 3e-17 seq4 98.7 1e-15 >seq15 Length=579413 Score = 136 bits (150), Expect = 6e-27 Identities = 181/249 (73%), Gaps = 3/249 (1%) Strand=Plus/Minus Query 49959 ACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAG 50018 ||||||||| ||| ||||||||||||||||| || || |||||||| || || | Sbjct 218572 ACATGCGAAGTCGGTGTGCAGACCCTCGTCTCGGGAGATGAGCTCGTTGGAGAAGGTCAA 218513 Query 50019 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAA 50078 ||||||||| || |||||||| || ||||| || ||||| || || || || || ||||| Sbjct 218512 TCCGGGCATGAGACCACGCTTCTTCAGCCAGAAGATGGAAGCGAAGGAACCGGAGAAGAA 218453 Query 50079 GATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGG--CGCT-GTCATG 50135 ||| || || || ||||||||||| | |||| || || | | | |||| ||| Sbjct 218452 GATACCCTCAACGGCGGCAAAGGCGATTAGTCGTTCGGCAAAGGTCGATCGCTCATCAGA 218393 Query 50136 TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATT 50195 |||||||| ||||||| | ||| ||||| | || || || || || ||||| | Sbjct 218392 GATCCACTTGAGAGCCCAGTTGGCTTTCTTGGCAATGCAGGGGATGGTGTCGATGGCTTC 218333 Query 50196 AAAGAGATA 50204 ||||| || Sbjct 218332 GAAGAGGTA 218324 >seq5 Length=1078720 Score = 104 bits (114), Expect = 3e-17 Identities = 473/746 (63%), Gaps = 48/746 (6%) Strand=Plus/Minus Query 79879 ACATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTT 79938 |||||| | | || || || ||| | |||||||||| | ||| || || || | Sbjct 587696 ACATCGGCGAGGCCTGGGCACTCGGCCGGACACATCAGAGTCCAGTCGCCGTCGGATTCG 587637 Query 79939 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGC-TATAAATAGATCTCTGGTTCTATG 79997 || || ||||| |||||||| ||||||||||| || || || || ||||| | || Sbjct 587636 ACACGCTTCATGAAGAGATCGGGAATCCAAAGGGCGTAGAACAAG-TCTCTTGCTCGGAC 587578 Query 79998 CTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGG 80057 ||||| ||||| ||||| | || ||||| | | | ||| | |||||| || Sbjct 587577 TTCCTCTTTTCCGTGGTTCTTACGCAAGTCCAGGAAGTCGAAGACATCGGCATGCCAAGG 587518 Query 80058 TTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGC 80117 || | ||| ||||| | | || || || ||||| || || || || | ||| | ||| Sbjct 587517 CTCAAGGTAGATGGCAAAGGCACCGGGGCGCTTGTTACCACCTTGGTCGACGTAACGAGC 587458 Query 80118 GGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTA-CCATTGGTCCCGG 80176 ||| | | | ||| || ||| || | ||||| || || ||| || ||||| |||| Sbjct 587457 TGTGGCGTCAAAGGCTCGCAGCATGGGGACGATACCGTTAGA-GTAGCCGTTGGTGCCGG 587399 Query 80177 AGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTT 80236 || || || ||||||| || || || ||||| || || || || | | Sbjct 587398 CAATGTATGAACCCTTGGCACGGATGTTGTGGATGTGGAGACCAATACCACCGGCGGTCT 587339 Query 80237 TAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCA 80296 | ||||| || || || | || || ||||||||||| || ||||| || Sbjct 587338 TGGAGATCTGAGCACAGGTCTTGAGAGTGTCGTAGATGCCCTCAATAGAGTCATCCCGCA 587279 Query 80297 TGTTAAGTAGAAAACAGCTAGACATTTG---GTGACGACTA-----GTTCCC--GC--AT 80344 || | || ||||| |||||| || |||| || || ||| || || Sbjct 587278 TGGCGACGAGGAAACATGAAGACATCTGAGCGTGAGGAGTACCAGCGTTGAAAAGCTAAT 587219 Query 80345 TA---------AATAAGG---------------TAGGAGAAGCGTGCGTAAACCATTTTT 80380 || |||| | | || |||||||| || || | | Sbjct 587218 TATCAGCTTGGAATACTGGTTTTTCACTCACAGTTGGGGAAGCGTGAGTGAAGTAACGCT 587159 Query 80381 CAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATC----CCATTGATGAATTCCT 80436 |||||| || ||||| |||||||| || || || | || | |||| || Sbjct 587158 CAGACATGAGGTTGTAGGTCTCAATGACTTTGTCAATGTTGGCGCCGTGGATG----CCG 587103 Query 80437 ACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAAC 80496 || ||||||||||| | |||||||||||||| ||| ||||||||| || || | | Sbjct 587102 ACAGCGACACGCATGATCATGTGCTGAGGTCGTTCGACGATCTTGCCGTTGATGCGGAGC 587043 Query 80497 AAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAA 80556 | ||| ||| || | ||| || ||||| || |||||||| | ||||| || ||||| Sbjct 587042 AGGTACGATCGCTCAAGAGTCTTGAAACCGAAGTAGTTGTAAGCGAAGTCACGGTCGTAG 586983 Query 80557 ATAATAACCGAGTTGAGTTTATCCTT 80582 || || | |||| ||| |||||| Sbjct 586982 ATGATGGCTGAGTCGAGAGCATCCTT 586957 >seq4 Length=1370089 Score = 98.7 bits (108), Expect = 1e-15 Identities = 96/124 (77%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 49981 CCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTT 50040 |||||||| | ||| || | ||||| |||||||| | || ||||| | || ||||| Sbjct 447638 CCCTCGTCGCGACTGATCAACTCGTTCGAAAACGTCAAACCAGGCATCAATCCTCGCTTC 447579 Query 50041 TTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTACTGCGGCAAAG 50100 || | ||| ||||| | |||||| ||||| ||||||||||| || || ||||| ||||| Sbjct 447578 TTCAACCAGAATATAGCCGCAAACGACCCCGAAAAGAAGATCCCCTCGACTGCTGCAAAC 447519 Query 50101 GCAA 50104 |||| Sbjct 447518 GCAA 447515 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718268279255120