Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeotremella_20skinneri_20[genbank_20GCA_5F001599695.1_202016-03- 01] 58 sequences; 20,788,256 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq4 105 6e-18 seq15 93.3 4e-14 >seq4 Length=1370089 Score = 105 bits (116), Expect = 6e-18 Identities = 102/131 (78%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 13681 CCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGtttt 13740 ||||| || | ||| || | ||||| ||||| || || || |||||||||||||| || Sbjct 447638 CCCTCGTCGCGACTGATCAACTCGTTCGAAAACGTCAAACCAGGCATCAATCCTCGCTTC 447579 Query 13741 tttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAAC 13800 || ||||| ||||| || || || || || |||||||| || ||||| ||||| |||||| Sbjct 447578 TTCAACCAGAATATAGCCGCAAACGACCCCGAAAAGAAGATCCCCTCGACTGCTGCAAAC 447519 Query 13801 GCTATTAGTCG 13811 || || || || Sbjct 447518 GCAATGAGGCG 447508 >seq15 Length=579413 Score = 93.3 bits (102), Expect = 4e-14 Identities = 108/146 (74%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 13675 TGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCT 13734 || || ||||| |||| || || ||||| || || || ||||| ||||| | || Sbjct 218556 TGCAGACCCTCGTCTCGGGAGATGAGCTCGTTGGAGAAGGTCAATCCGGGCATGAGACCA 218497 Query 13735 CGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCA 13794 || || || | ||| || || | |||||| || ||||| ||||| || |||||||| || Sbjct 218496 CGCTTCTTCAGCCAGAAGATGGAAGCGAAGGAACCGGAGAAGAAGATACCCTCAACGGCG 218437 Query 13795 GCAAACGCTATTAGTCGTTCTCCAAA 13820 ||||| || ||||||||||| |||| Sbjct 218436 GCAAAGGCGATTAGTCGTTCGGCAAA 218411 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478588453023120