Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeotremella_20skinneri_20[genbank_20GCA_5F001599695.1_202016-03- 01] 58 sequences; 20,788,256 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq15 109 8e-19 seq5 91.5 2e-13 >seq15 Length=579413 Score = 109 bits (120), Expect = 8e-19 Identities = 117/155 (75%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 125418 GCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCG 125477 ||||| |||| | || || |||||||| ||||| |||||||| || ||| || || Sbjct 218414 GCCGAACGACTAATCGCCTTTGCCGCCGTTGAGGGTATCTTCTTCTCCGGTTCCTTCGCT 218473 Query 125478 GCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTT 125537 ||||||| ||||| |||||||| || |||||||||||| |||| | |||||| | Sbjct 218474 TCCATCTTCTGGCTGAAGAAGCGTGGTCTCATGCCCGGATTGACCTTCTCCAACGAGCTC 218533 Query 125538 ATATCTCGAGACGAGGGCCTACACTGTGACTTTGC 125572 || || ||||||||||| || ||| ||||| || Sbjct 218534 ATCTCCCGAGACGAGGGTCTGCACACCGACTTCGC 218568 >seq5 Length=1078720 Score = 91.5 bits (100), Expect = 2e-13 Identities = 316/490 (64%), Gaps = 16/490 (3%) Strand=Plus/Plus Query 96876 CAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGAC 96935 || || || || || || || || || | ||| ||||| | || |||||||| || || Sbjct 587473 CAAGGTGGTAACAAGCGCCCCGGTGCCTTTGCCATCTACCTTGAGCCTTGGCATGCCGAT 587532 Query 96936 GTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGAC 96995 || || ||||| | || |||| || ||| || || || | ||||| || ||| Sbjct 587533 GTCTTCGACTTCCTGGACTTGCGTAAGAACCACGGAAAAGAGGAAGTCCGAGCAAGAGAC 587592 Query 96996 TTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGACGGTGGCTAC 97055 ||||| || || || ||| | || ||| | ||||||||||| ||| | || ||| || Sbjct 587593 TTGTTCTACGCCCTTTGGATTCCCGATCTCTTCATGAAGCGTGTCGAATCCGACGGCGAC 587652 Query 97056 TGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAGTTT 97115 |||| || ||||| || | | || || || || ||||| | |||||||||| Sbjct 587653 TGGACTCTGATGTGTCCGGCCGAGTGCCCAGGCCTCGCCGATGTCCACTCCGAAGAGTTT 587712 Query 97116 GAGGCCAAG---TACACGGCCTACGAGCAAGAGGGCCGATA-----CGTGAGACGAGTCG 97167 || ||| ||| | | |||| ||| ||||| || || |||| | || Sbjct 587713 GA---AAAGCTCTACGAGTCGTACG----AGAAGGCCGGTAAGGGTCGCAAGACCA-TCA 587764 Query 97168 ATGCACGAGAACTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACA 97227 | || | |||| ||| |||||| | |||||| ||||| || | || | || Sbjct 587765 AAGCCCAGAAACTTTGGTTTGCCATCCTCGAGGCTCAAACCGAGACCGGTAACCCCTTCA 587824 Query 97228 TTCTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGG 97287 | || ||||||||| | | ||| ||| |||||| | || | || || ||||| Sbjct 587825 TGCTTTACAAGGATGCTGCCAATGCCAAGTCCAACCAGCAACATCTCGGTACTATCAAAT 587884 Query 97288 GCTCCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGTTTGCG 97347 || |||| || ||||| | |||||| || | || || ||| || |||||| Sbjct 587885 CGAGTAACTTGTGTACCGAAATCATTGAGTACTCCGCCCCTGATGAGGTCGCTGTTTGCA 587944 Query 97348 TTCTGGCATC 97357 ||||||| Sbjct 587945 ACTTGGCATC 587954 Score = 89.7 bits (98), Expect = 8e-13 Identities = 167/240 (70%), Gaps = 4/240 (2%) Strand=Plus/Plus Query 97991 TGGGTCCATTCAAAACATTACCATCATCCCGGAAGAGTTGCGCAGAATCTACAAGACTGT 98050 ||| || ||||||||||| ||| |||||||| |||| | ||||||||||| || Sbjct 588707 TGGATCTATTCAAAACATCCCCAACATCCCGGCAGAGCTCAAGGCTATCTACAAGACCGT 588766 Query 98051 CTGGGAGAT-TCCGACCAAGACGCTGATCGATATGGCTGCCGACAGAGGTGTCTACATTG 98109 |||||||| ||| | ||| | | ||||| | ||||||||| | |||| | ||| | Sbjct 588767 GTGGGAGATCTCCCA-GAAGGCCGTCATCGACCTTGCTGCCGACCGTGGTGCTTTCATCG 588825 Query 98110 ACCAGAGTCAATCGTTCAATCTGTACGTTGCCGAGCCCA-CCTACAGTCGTATGACTTCG 98168 ||||| ||||| | || | | ||| ||| |||| ||| | | |||| || Sbjct 588826 ACCAGTCCCAATCCCTGAACATCCATCTTG-CGAACCCATCCTTCTCCCAGTTGACCTCC 588884 Query 98169 ATACACTTTTACGCATGGAACAAGGGCCTCAAGACGGGCATGTACTATCTGAGAACAAAG 98228 || ||||| |||| ||||| ||||| || ||||| || ||||| |||| || ||| Sbjct 588885 ATGCACTTCTACGGTTGGAAGAAGGGACTGAAGACTGGGTGCTACTACTTGAGGACCAAG 588944 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741058662732080