Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phaeotremella_20skinneri_20[genbank_20GCA_5F001599695.1_202016-03-
01] 58 sequences; 20,788,256 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq15 109 8e-19
seq5 91.5 2e-13
>seq15
Length=579413
Score = 109 bits (120), Expect = 8e-19
Identities = 117/155 (75%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 125418 GCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCG 125477
||||| |||| | || || |||||||| ||||| |||||||| || ||| || ||
Sbjct 218414 GCCGAACGACTAATCGCCTTTGCCGCCGTTGAGGGTATCTTCTTCTCCGGTTCCTTCGCT 218473
Query 125478 GCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTT 125537
||||||| ||||| |||||||| || |||||||||||| |||| | |||||| |
Sbjct 218474 TCCATCTTCTGGCTGAAGAAGCGTGGTCTCATGCCCGGATTGACCTTCTCCAACGAGCTC 218533
Query 125538 ATATCTCGAGACGAGGGCCTACACTGTGACTTTGC 125572
|| || ||||||||||| || ||| ||||| ||
Sbjct 218534 ATCTCCCGAGACGAGGGTCTGCACACCGACTTCGC 218568
>seq5
Length=1078720
Score = 91.5 bits (100), Expect = 2e-13
Identities = 316/490 (64%), Gaps = 16/490 (3%)
Strand=Plus/Plus
Query 96876 CAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGAC 96935
|| || || || || || || || || | ||| ||||| | || |||||||| || ||
Sbjct 587473 CAAGGTGGTAACAAGCGCCCCGGTGCCTTTGCCATCTACCTTGAGCCTTGGCATGCCGAT 587532
Query 96936 GTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGAC 96995
|| || ||||| | || |||| || ||| || || || | ||||| || |||
Sbjct 587533 GTCTTCGACTTCCTGGACTTGCGTAAGAACCACGGAAAAGAGGAAGTCCGAGCAAGAGAC 587592
Query 96996 TTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGACGGTGGCTAC 97055
||||| || || || ||| | || ||| | ||||||||||| ||| | || ||| ||
Sbjct 587593 TTGTTCTACGCCCTTTGGATTCCCGATCTCTTCATGAAGCGTGTCGAATCCGACGGCGAC 587652
Query 97056 TGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAGTTT 97115
|||| || ||||| || | | || || || || ||||| | ||||||||||
Sbjct 587653 TGGACTCTGATGTGTCCGGCCGAGTGCCCAGGCCTCGCCGATGTCCACTCCGAAGAGTTT 587712
Query 97116 GAGGCCAAG---TACACGGCCTACGAGCAAGAGGGCCGATA-----CGTGAGACGAGTCG 97167
|| ||| ||| | | |||| ||| ||||| || || |||| | ||
Sbjct 587713 GA---AAAGCTCTACGAGTCGTACG----AGAAGGCCGGTAAGGGTCGCAAGACCA-TCA 587764
Query 97168 ATGCACGAGAACTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACA 97227
| || | |||| ||| |||||| | |||||| ||||| || | || | ||
Sbjct 587765 AAGCCCAGAAACTTTGGTTTGCCATCCTCGAGGCTCAAACCGAGACCGGTAACCCCTTCA 587824
Query 97228 TTCTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGG 97287
| || ||||||||| | | ||| ||| |||||| | || | || || |||||
Sbjct 587825 TGCTTTACAAGGATGCTGCCAATGCCAAGTCCAACCAGCAACATCTCGGTACTATCAAAT 587884
Query 97288 GCTCCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGTTTGCG 97347
|| |||| || ||||| | |||||| || | || || ||| || ||||||
Sbjct 587885 CGAGTAACTTGTGTACCGAAATCATTGAGTACTCCGCCCCTGATGAGGTCGCTGTTTGCA 587944
Query 97348 TTCTGGCATC 97357
|||||||
Sbjct 587945 ACTTGGCATC 587954
Score = 89.7 bits (98), Expect = 8e-13
Identities = 167/240 (70%), Gaps = 4/240 (2%)
Strand=Plus/Plus
Query 97991 TGGGTCCATTCAAAACATTACCATCATCCCGGAAGAGTTGCGCAGAATCTACAAGACTGT 98050
||| || ||||||||||| ||| |||||||| |||| | ||||||||||| ||
Sbjct 588707 TGGATCTATTCAAAACATCCCCAACATCCCGGCAGAGCTCAAGGCTATCTACAAGACCGT 588766
Query 98051 CTGGGAGAT-TCCGACCAAGACGCTGATCGATATGGCTGCCGACAGAGGTGTCTACATTG 98109
|||||||| ||| | ||| | | ||||| | ||||||||| | |||| | ||| |
Sbjct 588767 GTGGGAGATCTCCCA-GAAGGCCGTCATCGACCTTGCTGCCGACCGTGGTGCTTTCATCG 588825
Query 98110 ACCAGAGTCAATCGTTCAATCTGTACGTTGCCGAGCCCA-CCTACAGTCGTATGACTTCG 98168
||||| ||||| | || | | ||| ||| |||| ||| | | |||| ||
Sbjct 588826 ACCAGTCCCAATCCCTGAACATCCATCTTG-CGAACCCATCCTTCTCCCAGTTGACCTCC 588884
Query 98169 ATACACTTTTACGCATGGAACAAGGGCCTCAAGACGGGCATGTACTATCTGAGAACAAAG 98228
|| ||||| |||| ||||| ||||| || ||||| || ||||| |||| || |||
Sbjct 588885 ATGCACTTCTACGGTTGGAAGAAGGGACTGAAGACTGGGTGCTACTACTTGAGGACCAAG 588944
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741058662732080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |