Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeotremella_20skinneri_20[genbank_20GCA_5F001599695.1_202016-03- 01] 58 sequences; 20,788,256 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq15 134 3e-26 seq4 98.7 2e-15 >seq15 Length=579413 Score = 134 bits (148), Expect = 3e-26 Identities = 148/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || |||||||| ||||| ||||| || || |||| |||||||| || || ||||| Sbjct 38126 GTCGACTCTTTCTGGATATTGTAGTCCGAGAGGGTTCGGCCGTCTTCCAGCTGCTTTCCG 38185 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || || || || | |||||| || || || || || ||||| ||||||||||| | ||| Sbjct 38186 GCGAAGATCAGACGCTGTTGGTCTGGGGGGATACCCTCTTTGTCCTGAATCTTCGATTTC 38245 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 ||||| || | ||| || || || ||||| || || || ||||| || ||||| || Sbjct 38246 ACATTGTCGATGGTGTCAGAAGACTCAACCTCAAGAGTGATGGTCTTTCCGGTAAGAGTC 38305 Query 104543 TTTACAAATATCTGCAT 104559 || || || |||||||| Sbjct 38306 TTGACGAAGATCTGCAT 38322 Score = 102 bits (112), Expect = 2e-16 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407 || || || |||| ||||||||||| || || || ||||| || ||||| || || || Sbjct 37598 AGGACAAGGTGTAGAGTAGATTCTTTTTGGATGTTGTAGTCCGAAAGAGTCCTTCCATCC 37657 Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467 || | || || || ||||| || | ||||||||| || || || || || || || ||| Sbjct 37658 TCCAACTGCTTCCCGGCAAAGATCAACCTCTGTTGGTCTGGGGGAATGCCCTCCTTGTCC 37717 Query 104468 TGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTC 104527 || || || | || || || || | |||||| | ||| ||||| ||||| || ||| Sbjct 37718 TGGATTTTCGACTTCACGTTGTCGATGGTATCAGACGATTCAACCTCCAGTGTGATGGTC 37777 Query 104528 TTACCAGTAAG 104538 || || || || Sbjct 37778 TTTCCCGTTAG 37788 Score = 98.7 bits (108), Expect = 2e-15 Identities = 128/177 (72%), Gaps = 0/177 (0%) Strand=Plus/Plus Query 104384 TAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGA 104443 ||||| || || |||| ||||| || || || |||||||| ||||| | | |||||| Sbjct 38423 TAGTCGGACAGGGTTCGTCCGTCCTCAAGCTGCTTTCCAGCGAAAATCAAACGCTGTTGG 38482 Query 104444 TCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTA 104503 || ||||| || || || || ||||||||||| | || || || || | ||| || Sbjct 38483 TCTGGAGGAATGCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCGATGGTGTCTGAG 38542 Query 104504 GGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560 | || ||||| || || || ||||| || ||||| || || || || || |||||| Sbjct 38543 GACTCGACCTCCAGAGTGATGGTCTTGCCGGTAAGGGTCTTAACGAAGATTTGCATT 38599 >seq4 Length=1370089 Score = 98.7 bits (108), Expect = 2e-15 Identities = 96/124 (77%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 269139 TTGCTTTTGCCGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTTGGT 269198 |||| ||||| || || || || || |||||||||||||| ||||| ||||| || |||| Sbjct 447515 TTGCGTTTGCAGCAGTCGAGGGGATCTTCTTTTCGGGGTCGTTTGCGGCTATATTCTGGT 447574 Query 269199 TGAAGAAAAGAGGCCTTATGCCAGGATTAACTTTCTCTAACGAATTGATAAGCAGGGACG 269258 ||||||| |||| | ||||| || || || || || ||||| ||||| || | |||| Sbjct 447575 TGAAGAAGCGAGGATTGATGCCTGGTTTGACGTTTTCGAACGAGTTGATCAGTCGCGACG 447634 Query 269259 AAGG 269262 | || Sbjct 447635 AGGG 447638 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151397544367064