Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phaeotremella_20skinneri_20[genbank_20GCA_5F001599695.1_202016-03-
01] 58 sequences; 20,788,256 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq15 134 3e-26
seq4 98.7 2e-15
>seq15
Length=579413
Score = 134 bits (148), Expect = 3e-26
Identities = 148/197 (75%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| || |||||||| ||||| ||||| || || |||| |||||||| || || |||||
Sbjct 38126 GTCGACTCTTTCTGGATATTGTAGTCCGAGAGGGTTCGGCCGTCTTCCAGCTGCTTTCCG 38185
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
|| || || || | |||||| || || || || || ||||| ||||||||||| | |||
Sbjct 38186 GCGAAGATCAGACGCTGTTGGTCTGGGGGGATACCCTCTTTGTCCTGAATCTTCGATTTC 38245
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
||||| || | ||| || || || ||||| || || || ||||| || ||||| ||
Sbjct 38246 ACATTGTCGATGGTGTCAGAAGACTCAACCTCAAGAGTGATGGTCTTTCCGGTAAGAGTC 38305
Query 104543 TTTACAAATATCTGCAT 104559
|| || || ||||||||
Sbjct 38306 TTGACGAAGATCTGCAT 38322
Score = 102 bits (112), Expect = 2e-16
Identities = 137/191 (72%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407
|| || || |||| ||||||||||| || || || ||||| || ||||| || || ||
Sbjct 37598 AGGACAAGGTGTAGAGTAGATTCTTTTTGGATGTTGTAGTCCGAAAGAGTCCTTCCATCC 37657
Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467
|| | || || || ||||| || | ||||||||| || || || || || || || |||
Sbjct 37658 TCCAACTGCTTCCCGGCAAAGATCAACCTCTGTTGGTCTGGGGGAATGCCCTCCTTGTCC 37717
Query 104468 TGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTC 104527
|| || || | || || || || | |||||| | ||| ||||| ||||| || |||
Sbjct 37718 TGGATTTTCGACTTCACGTTGTCGATGGTATCAGACGATTCAACCTCCAGTGTGATGGTC 37777
Query 104528 TTACCAGTAAG 104538
|| || || ||
Sbjct 37778 TTTCCCGTTAG 37788
Score = 98.7 bits (108), Expect = 2e-15
Identities = 128/177 (72%), Gaps = 0/177 (0%)
Strand=Plus/Plus
Query 104384 TAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGA 104443
||||| || || |||| ||||| || || || |||||||| ||||| | | ||||||
Sbjct 38423 TAGTCGGACAGGGTTCGTCCGTCCTCAAGCTGCTTTCCAGCGAAAATCAAACGCTGTTGG 38482
Query 104444 TCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTA 104503
|| ||||| || || || || ||||||||||| | || || || || | ||| ||
Sbjct 38483 TCTGGAGGAATGCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCGATGGTGTCTGAG 38542
Query 104504 GGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560
| || ||||| || || || ||||| || ||||| || || || || || ||||||
Sbjct 38543 GACTCGACCTCCAGAGTGATGGTCTTGCCGGTAAGGGTCTTAACGAAGATTTGCATT 38599
>seq4
Length=1370089
Score = 98.7 bits (108), Expect = 2e-15
Identities = 96/124 (77%), Gaps = 0/124 (0%)
Strand=Plus/Plus
Query 269139 TTGCTTTTGCCGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTTGGT 269198
|||| ||||| || || || || || |||||||||||||| ||||| ||||| || ||||
Sbjct 447515 TTGCGTTTGCAGCAGTCGAGGGGATCTTCTTTTCGGGGTCGTTTGCGGCTATATTCTGGT 447574
Query 269199 TGAAGAAAAGAGGCCTTATGCCAGGATTAACTTTCTCTAACGAATTGATAAGCAGGGACG 269258
||||||| |||| | ||||| || || || || || ||||| ||||| || | ||||
Sbjct 447575 TGAAGAAGCGAGGATTGATGCCTGGTTTGACGTTTTCGAACGAGTTGATCAGTCGCGACG 447634
Query 269259 AAGG 269262
| ||
Sbjct 447635 AGGG 447638
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151397544367064
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |