Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeotremella_20skinneri_20[genbank_20GCA_5F001599695.1_202016-03- 01] 58 sequences; 20,788,256 total letters Query= NC_006883.2 Length=252401 Score E Sequences producing significant alignments: (Bits) Value seq7 141 2e-28 >seq7 Length=1014673 Score = 141 bits (156), Expect = 2e-28 Identities = 328/492 (67%), Gaps = 8/492 (2%) Strand=Plus/Plus Query 193647 GAGATCTATAATCTTGGTGCTCAAAGTCATGTTAAAGTTTCCTTTGAGATGCCAGAGTAT 193706 |||||||| ||||| || ||||| |||||| ||||| || || || ||| | || || Sbjct 187230 GAGATCTACAATCTCGGAGCTCAGTCTCATGTCAAAGTGTCATTCGAAATGGCGGAATAC 187289 Query 193707 ACTTCTAATGTTGATGCTTTAGGAACTCTTAGAATACTTGAAGCAGTTCGTATGTTGGGA 193766 || |||| |||| |||| ||||| | |||| || ||| | || | | || Sbjct 187290 ACCGGCGATGTCGATGGCCTAGGGACTCTGCGTCTACTCGATGCAATCCGGACTTGCGGG 187349 Query 193767 ATGGAGAAAGATGTTCGCATCTATCAGGCATCTACCAGCGAACTGTATGGTGGTGTTCTA 193826 ||||||| |||| || |||||||||| |||||| ||| |||| ||| || | Sbjct 187350 TTGGAGAAGCATGTCCGATTCTATCAGGCTTCTACCTCTGAATTGTACGGTAAAGTGGTC 187409 Query 193827 GGCACTCCACTATCAGAAACCACACCATTTCATCCACGCTCTCCTTATGGTGTAGCAAAG 193886 | || || | |||| || || ||||| | || | || || || || || ||||| Sbjct 187410 GAAACCCCGCAGACAGAGACGACCCCATTCTACCCTAGGTCGCCATACGGCGTGGCAAAA 187469 Query 193887 TTGTATGGTTATTGGATCATCAAGAATTATCGTGAGTCATATGGA---TTC-CACGCTAG 193942 |||| | | |||||| || ||||| || || ||||||||| ||| || || | Sbjct 187470 CTGTACGCATTCTGGATCGTCGTCAATTACCGGGAATCATATGGAATGTTCACATGCAAC 187529 Query 193943 TTCTGGTATTCTCTTCAATCACGAATCTCCAAGAAGAGGTGAGACATTTGTAACTCGTAA 194002 || ||||| ||||| ||||| || || | ||||| ||||||||||| || || Sbjct 187530 ----GGGATTCTGTTCAACCACGAGTCACCTCGCCGAGGTCGAACATTTGTAACACGAAA 187585 Query 194003 GATTACACAAGGTTTATCTAAGATCTCTGTTGGATTACAGAAGATTCTTTATCTTGGTAA 194062 |||| | | || || | | || ||| || || ||| | ||| | || || Sbjct 187586 GATTTCTCGAGCGGTAGCCGAAATAGCTGCAGGGAAACTAGAGACATTGTATTTGGGGAA 187645 Query 194063 TCTTAATGCTAAGAGGGATTGGGGACACGCAAAGGATTATGTTGAAGCGATGTGGTTAAT 194122 | | || | || || |||||||| || || || || ||||| |||| |||||| | || Sbjct 187646 TATCCATTCGAAAAGAGATTGGGGCCATGCTAAAGACTATGTGGAAGGAATGTGGCTGAT 187705 Query 194123 GTTGCAACAGGA 194134 | | ||||| || Sbjct 187706 GCTCCAACAAGA 187717 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 807554614522480