Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeotremella_20skinneri_20[genbank_20GCA_5F001599695.1_202016-03- 01] 58 sequences; 20,788,256 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq15 141 1e-28 seq5 114 2e-20 seq4 87.8 2e-12 >seq15 Length=579413 Score = 141 bits (156), Expect = 1e-28 Identities = 182/249 (73%), Gaps = 3/249 (1%) Strand=Plus/Minus Query 33303 ACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAG 33362 ||||||||| ||| ||||||||||||||||| || || |||||||| || || | Sbjct 218572 ACATGCGAAGTCGGTGTGCAGACCCTCGTCTCGGGAGATGAGCTCGTTGGAGAAGGTCAA 218513 Query 33363 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAA 33422 ||||||||| || |||||||| || ||||| || ||||||||||| || || || ||||| Sbjct 218512 TCCGGGCATGAGACCACGCTTCTTCAGCCAGAAGATGGAAGCGAAGGAACCGGAGAAGAA 218453 Query 33423 GATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATA--ACCGGCGCT-GTCATG 33479 ||| || || || || |||||||| || |||| || || | | |||| ||| Sbjct 218452 GATACCCTCAACGGCGGCAAAGGCGATTAGTCGTTCGGCAAAGGTCGATCGCTCATCAGA 218393 Query 33480 TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATT 33539 |||||||| ||||||| | ||| ||||| | || || || || || ||||| | Sbjct 218392 GATCCACTTGAGAGCCCAGTTGGCTTTCTTGGCAATGCAGGGGATGGTGTCGATGGCTTC 218333 Query 33540 AAAGAGATA 33548 ||||| || Sbjct 218332 GAAGAGGTA 218324 >seq5 Length=1078720 Score = 114 bits (126), Expect = 2e-20 Identities = 466/733 (64%), Gaps = 46/733 (6%) Strand=Plus/Minus Query 63168 CCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATA 63227 || || || || |||||||||||| | ||| || ||||| | || || ||||| Sbjct 587684 CCTGGGCACTCGGCCGGACACATCAGAGTCCAGTCGCCGTCGGATTCGACACGCTTCATG 587625 Query 63228 AAGAGATCAGGAATCCAAAGAGC-TATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCC 63286 |||||||| ||||||||||| || || || || ||||| | || |||||| ||||| Sbjct 587624 AAGAGATCGGGAATCCAAAGGGCGTAGAACAAG-TCTCTTGCTCGGACTTCCTCTTTTCC 587566 Query 63287 TGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATAT 63346 ||||| | || ||||| | | | ||| | |||||| || || | ||| || Sbjct 587565 GTGGTTCTTACGCAAGTCCAGGAAGTCGAAGACATCGGCATGCCAAGGCTCAAGGTAGAT 587506 Query 63347 GGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATA 63406 ||| | | || || || ||||| || || || || | ||| | ||| ||| | | | Sbjct 587505 GGCAAAGGCACCGGGGCGCTTGTTACCACCTTGGTCGACGTAACGAGCTGTGGCGTCAAA 587446 Query 63407 AACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCC 63466 ||| || ||| || | |||||||| || || ||||| |||| || || || Sbjct 587445 GGCTCGCAGCATGGGGACGATACCGTTAGAGTAGCCGTTGGTGCCGGCAATGTATGAACC 587386 Query 63467 ACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGC 63526 ||||||| || || || ||||| || || || || | || ||||| || Sbjct 587385 CTTGGCACGGATGTTGTGGATGTGGAGACCAATACCACCGGCGGTCTTGGAGATCTGAGC 587326 Query 63527 GCATCGTTTTAACGTGTCATAGATACCCTCTATGCTATCATCGATCATGTTAAGTAGAAA 63586 || || | ||||| ||||| ||||| || ||||| |||| | || || Sbjct 587325 ACAGGTCTTGAGAGTGTCGTAGATGCCCTCAATAGAGTCATCCCGCATGGCGACGAGGAA 587266 Query 63587 ACAGCTAGACATTTG---GTGACGACTA-----GTTCCC--GC--ATTA---------AA 63625 ||| |||||| || |||| || || ||| || |||| || Sbjct 587265 ACATGAAGACATCTGAGCGTGAGGAGTACCAGCGTTGAAAAGCTAATTATCAGCTTGGAA 587206 Query 63626 TAAGG---------------TAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATT 63670 || | | || |||||||| || || | ||||| | || || Sbjct 587205 TACTGGTTTTTCACTCACAGTTGGGGAAGCGTGAGTGAAGTAACGCTCAGACATGAGGTT 587146 Query 63671 GTACGTCTCAATAGCTGAGTCTATATC----CCATTGATGAATTCCTACTGCGACACGCA 63726 ||| |||||||| || ||| || | || | |||| || || |||||||||| Sbjct 587145 GTAGGTCTCAATGACTTTGTCAATGTTGGCGCCGTGGATG----CCGACAGCGACACGCA 587090 Query 63727 TTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTT 63786 | | |||||||||||||| ||| ||||||||| ||| || | || ||| ||| | Sbjct 587089 TGATCATGTGCTGAGGTCGTTCGACGATCTTGCCGTTGATGCGGAGCAGGTACGATCGCT 587030 Query 63787 CCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGT 63846 | | ||| || ||||| || |||||||| | ||||| || ||||| || || | |||| Sbjct 587029 CAAGAGTCTTGAAACCGAAGTAGTTGTAAGCGAAGTCACGGTCGTAGATGATGGCTGAGT 586970 Query 63847 TGAGTTTATCCTT 63859 ||| |||||| Sbjct 586969 CGAGAGCATCCTT 586957 >seq4 Length=1370089 Score = 87.8 bits (96), Expect = 2e-12 Identities = 96/128 (75%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 33325 CCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTT 33384 |||||||| | ||| || | ||||| |||||||| | || ||||| | || ||||| Sbjct 447638 CCCTCGTCGCGACTGATCAACTCGTTCGAAAACGTCAAACCAGGCATCAATCCTCGCTTC 447579 Query 33385 TTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCTACTGCAGCAAAG 33444 || | ||| ||||| | || || || || ||||||||||| || || ||||| ||||| Sbjct 447578 TTCAACCAGAATATAGCCGCAAACGACCCCGAAAAGAAGATCCCCTCGACTGCTGCAAAC 447519 Query 33445 GCAATAAG 33452 ||||| || Sbjct 447518 GCAATGAG 447511 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622946748363280