Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeotremella_20skinneri_20[genbank_20GCA_5F001599695.1_202016-03- 01] 58 sequences; 20,788,256 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq5 127 3e-24 seq15 116 5e-21 >seq5 Length=1078720 Score = 127 bits (140), Expect = 3e-24 Identities = 478/746 (64%), Gaps = 48/746 (6%) Strand=Plus/Minus Query 63011 ACATTGTCCAGTCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTC 63070 |||| | | || || || || || |||||||||||| | ||| || ||||| | Sbjct 587696 ACATCGGCGAGGCCTGGGCACTCGGCCGGACACATCAGAGTCCAGTCGCCGTCGGATTCG 587637 Query 63071 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGC-TATAAATAGATCTCTGGTTCTATG 63129 || || ||||| |||||||| ||||||||||| || || || || ||||| | || Sbjct 587636 ACACGCTTCATGAAGAGATCGGGAATCCAAAGGGCGTAGAACAAG-TCTCTTGCTCGGAC 587578 Query 63130 TTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGG 63189 |||||| ||||| ||||| | || ||||| | | | ||| | |||||| || Sbjct 587577 TTCCTCTTTTCCGTGGTTCTTACGCAAGTCCAGGAAGTCGAAGACATCGGCATGCCAAGG 587518 Query 63190 TTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGC 63249 || | ||| ||||| | | || || || ||||| || || || || | ||| | ||| Sbjct 587517 CTCAAGGTAGATGGCAAAGGCACCGGGGCGCTTGTTACCACCTTGGTCGACGTAACGAGC 587458 Query 63250 GGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTA-CCATTGGTCCCTG 63308 ||| | | | ||| || ||| || | ||||| || || ||| || ||||| || | Sbjct 587457 TGTGGCGTCAAAGGCTCGCAGCATGGGGACGATACCGTTAGA-GTAGCCGTTGGTGCCGG 587399 Query 63309 AGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTT 63368 || || || ||||||| || || || ||||| || || || || | | Sbjct 587398 CAATGTATGAACCCTTGGCACGGATGTTGTGGATGTGGAGACCAATACCACCGGCGGTCT 587339 Query 63369 TAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCA 63428 | ||||| || || || | || || ||||||||||| ||| |||||| || Sbjct 587338 TGGAGATCTGAGCACAGGTCTTGAGAGTGTCGTAGATGCCCTCAATAGAGTCATCCCGCA 587279 Query 63429 TGTTAAGTAGAAAACAGCTAGACATTTG---GTGACGACTA-----GTTCCC--GC--AT 63476 || | || ||||| |||||| || |||| || || ||| || || Sbjct 587278 TGGCGACGAGGAAACATGAAGACATCTGAGCGTGAGGAGTACCAGCGTTGAAAAGCTAAT 587219 Query 63477 TA---------AATAAGG---------------TAGGAGAAGCGTGAGTAAACCATTTTT 63512 || |||| | | || ||||||||||| || | | Sbjct 587218 TATCAGCTTGGAATACTGGTTTTTCACTCACAGTTGGGGAAGCGTGAGTGAAGTAACGCT 587159 Query 63513 CAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATC----CCATTGATGAATTCCT 63568 |||| | || ||||| |||||||| || ||| || | || | |||| || Sbjct 587158 CAGACATGAGGTTGTAGGTCTCAATGACTTTGTCAATGTTGGCGCCGTGGATG----CCG 587103 Query 63569 ACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAAC 63628 || ||||||||||| | |||||||||||||| ||| ||||||||| ||| || | | Sbjct 587102 ACAGCGACACGCATGATCATGTGCTGAGGTCGTTCGACGATCTTGCCGTTGATGCGGAGC 587043 Query 63629 AAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAA 63688 | ||| ||| || | ||| || ||||| || |||||||| | ||||| || ||||| Sbjct 587042 AGGTACGATCGCTCAAGAGTCTTGAAACCGAAGTAGTTGTAAGCGAAGTCACGGTCGTAG 586983 Query 63689 ATAATAACCGAGTTGAGTTTATCCTT 63714 || || | |||| ||| |||||| Sbjct 586982 ATGATGGCTGAGTCGAGAGCATCCTT 586957 >seq15 Length=579413 Score = 116 bits (128), Expect = 5e-21 Identities = 153/210 (73%), Gaps = 3/210 (1%) Strand=Plus/Minus Query 32660 ACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAG 32719 ||||||||| ||| ||| ||||||||||||| || | |||||||| || || | Sbjct 218572 ACATGCGAAGTCGGTGTGCAGACCCTCGTCTCGGGAGATGAGCTCGTTGGAGAAGGTCAA 218513 Query 32720 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAA 32779 ||||||||| || |||||||| || ||||| || ||||| || || || || || ||||| Sbjct 218512 TCCGGGCATGAGACCACGCTTCTTCAGCCAGAAGATGGAAGCGAAGGAACCGGAGAAGAA 218453 Query 32780 AATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA--ACCGGCGCT-GTCATG 32836 || || || || || |||||||| || |||| || || | | |||| ||| Sbjct 218452 GATACCCTCAACGGCGGCAAAGGCGATTAGTCGTTCGGCAAAGGTCGATCGCTCATCAGA 218393 Query 32837 TATCCACTTTTGAGCCCAATCGGCCTTCTT 32866 |||||||| ||||||| | ||| ||||| Sbjct 218392 GATCCACTTGAGAGCCCAGTTGGCTTTCTT 218363 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633631540616800