Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phaeotremella_20skinneri_20[genbank_20GCA_5F001599695.1_202016-03-
01] 58 sequences; 20,788,256 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq15 100 2e-16
>seq15
Length=579413
Score = 100 bits (110), Expect = 2e-16
Identities = 153/215 (71%), Gaps = 6/215 (3%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || || || |||||| | ||||| || ||||||| | || || ||||| |||
Sbjct 38322 ATGCAGATCTTCGTCAAGACTCTTACCGGAAAGACCATCACTCTTGAGGTTGAGTCTTCT 38263
Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115
||||| ||||| || || || | || | ||| |||||||| || || || || |||
Sbjct 38262 GACACCATCGA--CAATGTGAAATCGAAGATTCAG-GACAAAGAGGGTATCCCCCCAGAC 38206
Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175
|||||||| | || || ||||| || || | ||||| | || || | || |||
Sbjct 38205 CAACAGCGTCTGATCTTCGCCGGAAAGCAGCTGGAAGACGGCCGAACCCTCTCGGACTAC 38146
Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
||||| || ||||| || ||||| || || || ||
Sbjct 38145 AATATCCAGAAAGAGTCGACGCTTCACTTGGTCCT 38111
Score = 98.7 bits (108), Expect = 9e-16
Identities = 123/169 (73%), Gaps = 0/169 (0%)
Strand=Plus/Minus
Query 25033 CCATCACAGTCGAAGTGGAGTCGTCTGACACTATCGAGTCACTGAAGCAAAAAATCACTG 25092
|||||||| | || || || |||||||| || ||||| ||||| |||||| |
Sbjct 37775 CCATCACACTGGAGGTTGAATCGTCTGATACCATCGACAACGTGAAGTCGAAAATCCAGG 37716
Query 25093 ACAAAGAAGGGATTCCACCTGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAG 25152
|||| || || ||||| || ||||||||| || | || |||||||| || || || || |
Sbjct 37715 ACAAGGAGGGCATTCCCCCAGACCAACAGAGGTTGATCTTTGCCGGGAAGCAGTTGGAGG 37656
Query 25153 ATGATCGCACTGTGGGCGATTACAATATTCAAAAAGAATCCACGCTACA 25201
||| | ||| | || ||||| || ||||||||||| || |||||
Sbjct 37655 ATGGAAGGACTCTTTCGGACTACAACATCCAAAAAGAATCTACTCTACA 37607
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433327693691270
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |