Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeotremella_20skinneri_20[genbank_20GCA_5F001599695.1_202016-03- 01] 58 sequences; 20,788,256 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq15 100 2e-16 >seq15 Length=579413 Score = 100 bits (110), Expect = 2e-16 Identities = 153/215 (71%), Gaps = 6/215 (3%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || |||||| | ||||| || ||||||| | || || ||||| ||| Sbjct 38322 ATGCAGATCTTCGTCAAGACTCTTACCGGAAAGACCATCACTCTTGAGGTTGAGTCTTCT 38263 Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 ||||| ||||| || || || | || | ||| |||||||| || || || || ||| Sbjct 38262 GACACCATCGA--CAATGTGAAATCGAAGATTCAG-GACAAAGAGGGTATCCCCCCAGAC 38206 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 |||||||| | || || ||||| || || | ||||| | || || | || ||| Sbjct 38205 CAACAGCGTCTGATCTTCGCCGGAAAGCAGCTGGAAGACGGCCGAACCCTCTCGGACTAC 38146 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 ||||| || ||||| || ||||| || || || || Sbjct 38145 AATATCCAGAAAGAGTCGACGCTTCACTTGGTCCT 38111 Score = 98.7 bits (108), Expect = 9e-16 Identities = 123/169 (73%), Gaps = 0/169 (0%) Strand=Plus/Minus Query 25033 CCATCACAGTCGAAGTGGAGTCGTCTGACACTATCGAGTCACTGAAGCAAAAAATCACTG 25092 |||||||| | || || || |||||||| || ||||| ||||| |||||| | Sbjct 37775 CCATCACACTGGAGGTTGAATCGTCTGATACCATCGACAACGTGAAGTCGAAAATCCAGG 37716 Query 25093 ACAAAGAAGGGATTCCACCTGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAG 25152 |||| || || ||||| || ||||||||| || | || |||||||| || || || || | Sbjct 37715 ACAAGGAGGGCATTCCCCCAGACCAACAGAGGTTGATCTTTGCCGGGAAGCAGTTGGAGG 37656 Query 25153 ATGATCGCACTGTGGGCGATTACAATATTCAAAAAGAATCCACGCTACA 25201 ||| | ||| | || ||||| || ||||||||||| || ||||| Sbjct 37655 ATGGAAGGACTCTTTCGGACTACAACATCCAAAAAGAATCTACTCTACA 37607 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433327693691270