Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeotremella_20skinneri_20[genbank_20GCA_5F001599695.1_202016-03- 01] 58 sequences; 20,788,256 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq15 104 3e-17 >seq15 Length=579413 Score = 104 bits (114), Expect = 3e-17 Identities = 222/330 (67%), Gaps = 9/330 (3%) Strand=Plus/Minus Query 93092 CACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAA 93151 || || |||||||| || | ||| |||||||| || || | ||| ||| ||| || || Sbjct 218571 CATGCGAAGTCGGTGTGCAGACCCTCGTCTCGGGAGATGAGCTCGTTGGAGAAGGTCAAT 218512 Query 93152 CCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaT 93211 || || | || || || ||||| ||||| || || ||||| || ||| || || || Sbjct 218511 CCGGGCATGAGACCACGCTTCTTCAGCCAGAAGATGGAAGCGAAGGAACCGGAGAAGAAG 218452 Query 93212 ATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTGCT- 93270 ||||| || ||||| ||||| || | | ||||||||||| | | || || | Sbjct 218451 ATACCCTCAACGGCGGCAAAGGCGATTAGTCGTTCGGCAAAGGTCG----ATCGCTCATC 218396 Query 93271 ---GATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGC 93327 |||||| || | |||||| | |||||| || ||| || || | || ||||| || Sbjct 218395 AGAGATCCACTTGAGAGCCCAGTTGGCTTTCTTGGCAATGCAGGGGATGGTGTCGATGGC 218336 Query 93328 GTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATA 93387 | || |||||| || | | | || ||||| || ||||| | || || || Sbjct 218335 TTCGAAGAGGTAAGTCCGGCGGGCGGGGTCCTTGATGTAGGTGTCGATCAGGAGGGAGTA 218276 Query 93388 CATTTCAGAATGGACATTCTCCATTGCAAT 93417 | ||||| |||| |||||| |||||| Sbjct 218275 GGTCTCAGAGTGGATGTTCTCC-CTGCAAT 218247 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556860396275920