Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeotremella_20skinneri_20[genbank_20GCA_5F001599695.1_202016-03- 01] 58 sequences; 20,788,256 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq15 118 9e-22 seq1 102 7e-17 >seq15 Length=579413 Score = 118 bits (130), Expect = 9e-22 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || ||| | ||||| || || | |||||||| ||||| | | Sbjct 38094 ATGCAGATCTTCGTCAAGACTCTTACCGGAAAGACCATTACTCTTGAGGTGGAGTCTTCG 38035 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | ||| || | ||| ||||| || |||||||||||||| || || || || Sbjct 38034 GATACCATAGACAATGTGAAATCCAAAATCCAGGACAAGGAGGGTATCCCCCCAGACCAG 37975 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || |||||||| ||||| |||||| ||||| | || || ||||| Sbjct 37974 CAGCGTCTGATCTTCGCCGGCAAGCAGTTGGAGGATGGGCGCACTTTGTCGGACTACAAT 37915 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || || || || || || | ||| | || |||| | || || ||| Sbjct 37914 ATCCAGAAGGAGTCTACACTTCATCTTGTCCTGCGTCTCCGTGGTGGT 37867 Score = 93.3 bits (102), Expect = 4e-14 Identities = 129/181 (71%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 22241 TAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAAC 22300 |||| || || || |||| || || || ||| | | |||||| | ||| | | || Sbjct 37787 TAACGGGAAAGACCATCACACTGGAGGTTGAATCGTCTGATACCATCGACAACGTGAAGT 37728 Query 22301 AAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCA 22360 ||||| || ||||||||||| ||||| || || ||||| | | || |||||||| | Sbjct 37727 CGAAAATCCAGGACAAGGAGGGCATTCCCCCAGACCAACAGAGGTTGATCTTTGCCGGGA 37668 Query 22361 AACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATAC 22420 | ||||| |||||| | || | || || |||||||| ||||||||||| || ||| Sbjct 37667 AGCAGTTGGAGGATGGAAGGACTCTTTCGGACTACAACATCCAAAAAGAATCTACTCTAC 37608 Query 22421 A 22421 | Sbjct 37607 A 37607 Score = 91.5 bits (100), Expect = 1e-13 Identities = 127/178 (71%), Gaps = 0/178 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| || ||||| || | ||||| || || ||||||| || || || || | Sbjct 38598 ATGCAAATCTTCGTTAAGACCCTTACCGGCAAGACCATCACTCTGGAGGTCGAGTCCTCA 38539 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | |||| || ||||| ||||||||||| ||||| || || ||| Sbjct 38538 GACACCATCGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGCATTCCTCCAGACCAA 38479 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396 || ||| | || || || || || ||| | ||||| || ||| | ||||| |||| Sbjct 38478 CAGCGTTTGATTTTCGCTGGAAAGCAGCTTGAGGACGGACGAACCCTGTCCGACTACA 38421 >seq1 Length=3245857 Score = 102 bits (112), Expect = 7e-17 Identities = 145/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302 || || ||||| |||| || || || || | | || ||| | ||| | |||| Sbjct 3091380 ACGGGCAAAACCATCACCCTCGAGGTTGAGTCTTCGGACACCATCGACAACGTCAAGTCC 3091439 Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || || || |||||||||||||| || || || ||||| ||||| || ||||| || ||| Sbjct 3091440 AAGATCCAGGACAAGGAGGGTATCCCCCCAGACCAACAGCGTCTCATCTTTGCTGGTAAA 3091499 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACAT 22422 ||| | |||||| || || ||||||| |||||||| || || || || ||| | || Sbjct 3091500 CAGCTCGAGGATGGACGTACTCTCTCCGACTACAACATCCAGAAGGAGTCTACCCTCCAC 3091559 Query 22423 TTAGTTTTGCGATTGCGCGGAGGT 22446 | || ||| | ||||| || ||| Sbjct 3091560 CTGGTGTTGAGGTTGCGTGGTGGT 3091583 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419727703304770