Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeotremella_20skinneri_20[genbank_20GCA_5F001599695.1_202016-03- 01] 58 sequences; 20,788,256 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq1 96.9 7e-15 seq2 84.2 4e-11 >seq1 Length=3245857 Score = 96.9 bits (106), Expect = 7e-15 Identities = 134/188 (71%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 279699 GGTTCTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACTGCGT 279758 || || || || ||||| |||||||||||| ||||||| |||| ||||| || | Sbjct 2634589 GGCTCCCTTTCCGGTGGATGGAAGATGAAGTTGGCCCTTGCTCGTGCCATCCTGTTCAAG 2634648 Query 279759 GCCGATGTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGCCTGG 279818 ||||| | || ||||||| ||||| ||||||||| |||| | |||||| ||||| Sbjct 2634649 GCCGACATTCTTTTGCTTGACGAGCCCACCAACCACTTGGATGTCCTCAACGTCACCTGG 2634708 Query 279819 CTAGTGTCCTACCTAACCAGTCTGAAGAATGTTTCTTCCCTCATTGTCTCTCACGACTCT 279878 || | |||||| ||| || | | | | ||| ||||||| || |||||||| Sbjct 2634709 CTCATTGACTACCTGACCTCCCTCACTCAGTGTACCTCCATCATTGTGTCCCACGACTCA 2634768 Query 279879 GGCTTCCT 279886 | |||||| Sbjct 2634769 GACTTCCT 2634776 Score = 89.7 bits (98), Expect = 1e-12 Identities = 111/150 (74%), Gaps = 3/150 (2%) Strand=Plus/Plus Query 280179 GGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCGAGACCCAGGCC 280238 || ||||| ||| | ||||| || || || |||| | |||||| |||||| || | Sbjct 2635072 GGTCCCAACGGTTCCGGTAAATCCACTCTTGTCAAGCTGTTGACTGCCGAGACAGAGCCT 2635131 Query 280239 ACTGAGGG--GT-CCGTTTGGAAGCATCCCAACATGCGGATGGCTTACGTCGCTCAGCAC 280295 | |||| || |||| |||||||| || ||| || || | |||||| || |||||| Sbjct 2635132 AACAAGGGTGGTACCGTCTGGAAGCACCCTAACTTGGTCATCGGTTACGTTGCGCAGCAC 2635191 Query 280296 GCTTTCCACCACATCGAGAACCACCTGGAC 280325 ||||||||||||||||| | ||||| ||| Sbjct 2635192 GCTTTCCACCACATCGATATGCACCTCGAC 2635221 Score = 89.7 bits (98), Expect = 1e-12 Identities = 102/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 280713 ATTCGCGGTCTTTCTGGAGGCCAGAAGGTCAAACTTGTCATCGGAGCAGCTCTGTGGCAA 280772 || || ||||||||||| || ||||||||||| |||| |||| || ||| |||| | Sbjct 2635624 ATGCGTGGTCTTTCTGGTGGTCAGAAGGTCAAGGTTGTGCTCGGTGCCGCTACATGGCGA 2635683 Query 280773 CACCCTCACGTGATCGTTCTCGACGAGCCTACCAACTATCTGGACCGCGAGAGCCTGGGC 280832 | || ||||| ||| | | |||||||| |||||||| || ||||| || ||| | Sbjct 2635684 CGACCCCACGTCATCTGTTTGGACGAGCCCACCAACTACCTCGACCGTGAATCCCTCGCT 2635743 Query 280833 GCTCTGAGTGCTGCTCT 280849 || || | ||||||||| Sbjct 2635744 GCCCTCATTGCTGCTCT 2635760 >seq2 Length=2215998 Score = 84.2 bits (92), Expect = 4e-11 Identities = 111/154 (72%), Gaps = 0/154 (0%) Strand=Plus/Plus Query 280168 TTGGTGTCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCG 280227 ||||| || | || ||||| ||||| || ||| ||| || |||||| | || ||||||| Sbjct 465592 TTGGTATCTTGGGTCCCAACGGTGCTGGAAAGAGTACTCTCATCAAATTACTTACTGGCG 465651 Query 280228 AGACCCAGGCCACTGAGGGGTCCGTTTGGAAGCATCCCAACATGCGGATGGCTTACGTCG 280287 ||||| | || || ||||| |||||||| | || | | |||||| | Sbjct 465652 AGACCGTTCCTCAAGAAGGTACCGTTCACAAGCATCCGGCACTCCGAGTTGGTTACGTGG 465711 Query 280288 CTCAGCACGCTTTCCACCACATCGAGAACCACCT 280321 ||||||||||||||||||||||| | |||| || Sbjct 465712 CTCAGCACGCTTTCCACCACATCAATCACCATCT 465745 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027836036188778