Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeotremella_20skinneri_20[genbank_20GCA_5F001599695.1_202016-03- 01] 58 sequences; 20,788,256 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq15 163 5e-35 seq7 158 2e-33 seq1 141 2e-28 seq12 87.8 3e-12 seq5 87.8 3e-12 >seq15 Length=579413 Score = 163 bits (180), Expect = 5e-35 Identities = 161/208 (77%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 68234 TCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGA 68293 ||| || ||||| || | || | |||||| || || |||||||||||||| || || || Sbjct 37582 TCCACCACGAAGACGGAGGACAAGGTGTAGAGTAGATTCTTTTTGGATGTTGTAGTCCGA 37641 Query 68294 GAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGG 68353 || ||||| ||||| || |||||||||||||| || || | || |||||||| || || Sbjct 37642 AAGAGTCCTTCCATCCTCCAACTGCTTCCCGGCAAAGATCAACCTCTGTTGGTCTGGGGG 37701 Query 68354 AATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTAC 68413 |||||| |||||||| || || || | ||| ||| |||||||| || | ||||| || Sbjct 37702 AATGCCCTCCTTGTCCTGGATTTTCGACTTCACGTTGTCGATGGTATCAGACGATTCAAC 37761 Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGAGG 68441 |||| |||||||| |||||||| ||| Sbjct 37762 CTCCAGTGTGATGGTCTTTCCCGTTAGG 37789 Score = 158 bits (174), Expect = 2e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || || | |||||||| ||||| |||||||| ||||| || || || ||| Sbjct 38096 CCACCACGGAGACGGAGGACCAAGTGAAGCGTCGACTCTTTCTGGATATTGTAGTCCGAG 38155 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || ||||| | |||||| |||||||| || || | |||||||| || || Sbjct 38156 AGGGTTCGGCCGTCTTCCAGCTGCTTTCCGGCGAAGATCAGACGCTGTTGGTCTGGGGGG 38215 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || || ||||| |||||||| | || || ||||||||||| | || || || Sbjct 38216 ATACCCTCTTTGTCCTGAATCTTCGATTTCACATTGTCGATGGTGTCAGAAGACTCAACC 38275 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | |||||||| ||||| || || ||||||||||| |||||||| Sbjct 38276 TCAAGAGTGATGGTCTTTCCGGTAAGAGTCTTGACGAAGATCTGCAT 38322 Score = 134 bits (148), Expect = 3e-26 Identities = 136/177 (77%), Gaps = 0/177 (0%) Strand=Plus/Plus Query 68286 TAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGG 68345 || ||||| || || | || || || | |||||| || ||||| || | | |||||| Sbjct 38423 TAGTCGGACAGGGTTCGTCCGTCCTCAAGCTGCTTTCCAGCGAAAATCAAACGCTGTTGG 38482 Query 68346 TCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT 68405 || || |||||||| |||||||| |||||||| | ||||||| ||||||||||||| Sbjct 38483 TCTGGAGGAATGCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCGATGGTGTCTGAG 38542 Query 68406 GATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 || || || |||| |||||||| || || || |||||||| ||||| || |||||| Sbjct 38543 GACTCGACCTCCAGAGTGATGGTCTTGCCGGTAAGGGTCTTAACGAAGATTTGCATT 38599 Score = 116 bits (128), Expect = 7e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || |||| || | || || || ||||| || ||||| || || || || Sbjct 37868 CCACCACGGAGACGCAGGACAAGATGAAGTGTAGACTCCTTCTGGATATTGTAGTCCGAC 37927 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 | || | |||||| || |||||||| |||||||| || || | || ||||| || || Sbjct 37928 AAAGTGCGCCCATCCTCCAACTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGG 37987 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || |||||||| || || || | || || || ||||| || | || || || Sbjct 37988 ATACCCTCCTTGTCCTGGATTTTGGATTTCACATTGTCTATGGTATCCGAAGACTCCACC 38047 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | || ||||| ||||| || || ||||||||||| |||||||| Sbjct 38048 TCAAGAGTAATGGTCTTTCCGGTAAGAGTCTTGACGAAGATCTGCAT 38094 Score = 84.2 bits (92), Expect = 4e-11 Identities = 163/234 (70%), Gaps = 9/234 (4%) Strand=Plus/Minus Query 10253 GTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGACAAACCCAGACCGGGCATGAGCCC 10312 ||| || |||||||| ||| ||||| ||||||||| || || ||||||||||| || Sbjct 218557 GTGCAGACCCTCGTCTCGGGAGATGAGCTCGTTGGAGAAGGTCAATCCGGGCATGAGACC 218498 Query 10313 CCGGTTGCGCAGCCAGAAAATGGCGCAGAACGACCCGGAGAACAGAAGACCCTCCACGCA 10372 || || ||||||||| |||| ||| || |||||||| | | |||||| ||| Sbjct 218497 ACGCTTCTTCAGCCAGAAGATGGAAGCGAAGGAACCGGAGAAGAAGATACCCTCAACGGC 218438 Query 10373 CACCCAGGCGACGAGGCGCTCTGCGAAGGAGCGGTCGCGC----GAAAAGTATTTCGAG- 10427 | |||||| || || || || |||| || |||| | || | | || ||| Sbjct 218437 GGCAAAGGCGATTAGTCGTTCGGCAAAGG-TCGATCGCTCATCAGAGATCCACTT-GAGA 218380 Query 10428 GCCCACGCTGCCTTCTTTCCCACGGCA-GGGATCGTCTCGATAGCCTCGAAGAG 10480 ||||| | || ||| || || ||| ||||| || ||||| || |||||||| Sbjct 218379 GCCCA-GTTGGCTTTCTTGGCAATGCAGGGGATGGTGTCGATGGCTTCGAAGAG 218327 >seq7 Length=1014673 Score = 158 bits (174), Expect = 2e-33 Identities = 337/491 (69%), Gaps = 18/491 (4%) Strand=Plus/Minus Query 268247 TGGAGCATTTTCCACATTGCTTCGACATAGTCCCGCGCATGGCCCCAATCGCGCTTTGCG 268306 |||||||| ||||||| |||| |||||||| |||||||||||||| | || | Sbjct 187711 TGGAGCATCAGCCACATTCCTTCCACATAGTCTTTAGCATGGCCCCAATCTCTTTTCGAA 187652 Query 268307 TCCATGTTCCCGAGGAACAGGCATTTCT---GCTTGCCG--AGCT-TCACGCGTGCAAGA 268360 | || ||||| | ||| || ||| | || || |||| | || || | Sbjct 187651 TGGATATTCCCCAAATACA---ATGTCTCTAGTTTCCCTGCAGCTATTTCG---GCTACC 187598 Query 268361 CCGCGAGTGATTTTTCGGGTCACGAACGTCTCG-CCACGTAGAGGGCTCTCGTGGTTGAA 268419 | |||| || ||||| || || || || ||| || || |||| |||||||||||| Sbjct 187597 GCTCGAGAAATCTTTCGTGTTACAAATGT-TCGACCTCGGCGAGGTGACTCGTGGTTGAA 187539 Query 268420 GAGGATGCCGTTGCACGCGAACATGCCATATGCCTCACGGTAGTTCACGACCGTCCAGTA 268479 || || |||||||| | |||||| ||||||| || ||||| || ||||| ||||| | Sbjct 187538 CAGAATCCCGTTGCATGTGAACATTCCATATGATTCCCGGTAATTGACGACGATCCAGAA 187479 Query 268480 TGCAAACATCTTTGCAACTGCGTACGGAGAACGTGGATGGAAGGGCGTCGTGATCT-TTT 268538 ||| ||| ||||| || |||| || || | || | ||| || ||||| ||| | | Sbjct 187478 TGCGTACAGTTTTGCCACGCCGTATGGCGACCTAGGGTAGAATGGGGTCGT-CTCTGTCT 187420 Query 268539 GAGGGATTTCTCGGACTTTGCCAAAGAGCTCGGAGGTCGATGCTTGGTAGAA-CTTTGTT 268597 | ||| |||| ||||| || | | || ||||| || || || ||||| | | Sbjct 187419 GCGGGGTTTCGACCACTTTACCGTACAATTCAGAGGTAGAAGCCTGATAGAATCGGACAT 187360 Query 268598 GTTTTTTCGAGACCGCAGATTCGGATTGCCTCGAGCAAACGAAGAGTTCCCATGCCATCC 268657 | || || | ||||| | |||||||| ||||| | ||| ||||| || | |||||| Sbjct 187359 G-CTTCTCCAACCCGCAAGTCCGGATTGCATCGAGTAGACGCAGAGTCCCTAGGCCATCG 187301 Query 268658 ACGTCCGCTGTATACTCCGGCATCTCGAATGACACCTGGACATGGCTCTGGGCGCCCAGG 268717 || || | || || |||| ||| ||||||||||| | |||||| ||| || || || Sbjct 187300 ACATCGCCGGTGTATTCCGCCATTTCGAATGACACTTTGACATGAGACTGAGCTCCGAGA 187241 Query 268718 TTATAAACCTC 268728 || || | ||| Sbjct 187240 TTGTAGATCTC 187230 >seq1 Length=3245857 Score = 141 bits (156), Expect = 2e-28 Identities = 147/193 (76%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| |||| ||| || || ||||| || |||||||| || |||||||| || | ||||| Sbjct 3091568 CAACACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTACGTCCATC 3091509 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 || | ||| || || || || ||||| | |||||||| || || || || |||||||| Sbjct 3091508 CTCGAGCTGTTTACCAGCAAAGATGAGACGCTGTTGGTCTGGGGGGATACCCTCCTTGTC 3091449 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 || ||||| | ||||||| ||||||||||| | || || || || | ||||||||| Sbjct 3091448 CTGGATCTTGGACTTGACGTTGTCGATGGTGTCCGAAGACTCAACCTCGAGGGTGATGGT 3091389 Query 68429 TTTTCCCGTGAGG 68441 ||| ||||| ||| Sbjct 3091388 TTTGCCCGTAAGG 3091376 Score = 114 bits (126), Expect = 2e-20 Identities = 144/195 (74%), Gaps = 2/195 (1%) Strand=Plus/Minus Query 225449 AGGAAGCCAGAGTCGTGGGACACAATGATGGACG-ACACGTTCGTCAGGCCCTTGAGGTG 225507 |||||| | ||||||||||||||||||||||| | |||| | || ||| | |||| Sbjct 2634776 AGGAAGTCTGAGTCGTGGGACACAATGATGGAGGTACAC-TGAGTGAGGGAGGTCAGGTA 2634718 Query 225508 CGTGATGAGCCATGCCACGTTGCTGACGTCCATGTGGTTTGTAGGTTCGTCCAGAAGCAG 225567 |||||||| | |||||| ||| |||| |||||| || || ||||| || | || Sbjct 2634717 GTCAATGAGCCAGGTGACGTTGAGGACATCCAAGTGGTTGGTGGGCTCGTCAAGCAAAAG 2634658 Query 225568 GATGTCAGCATCAATGAGGATGGCGCGCGTGAGAGACAGCTTCATTTTCCAGCCCCCGGA 225627 ||||| || | | |||||||| || | || | || |||||| ||||| || ||||| Sbjct 2634657 AATGTCGGCCTTGAACAGGATGGCACGAGCAAGGGCCAACTTCATCTTCCATCCACCGGA 2634598 Query 225628 CAGGGAGCCGATTGA 225642 ||||||||||| || Sbjct 2634597 AAGGGAGCCGATAGA 2634583 >seq12 Length=702644 Score = 87.8 bits (96), Expect = 3e-12 Identities = 108/148 (73%), Gaps = 0/148 (0%) Strand=Plus/Minus Query 68294 GAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGG 68353 ||| ||||| || || || | ||| ||||||||||| || | || || ||||| || || Sbjct 575079 GAGAGTCCTGCCGTCCTCGAGCTGTTTCCCGGCGAAAATCAATCGCTGCTGGTCTGGGGG 575020 Query 68354 AATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTAC 68413 || || || ||||| || || || | ||||| ||||| ||||| | || || || Sbjct 575019 GATACCCTCTTTGTCCTGGATTTTGGATTTGACATTGTCGATCGTGTCCGAAGACTCGAC 574960 Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGAGG 68441 || | ||||||||| || ||||||||| Sbjct 574959 CTCGAGGGTGATGGTCTTGCCCGTGAGG 574932 >seq5 Length=1078720 Score = 87.8 bits (96), Expect = 3e-12 Identities = 167/243 (69%), Gaps = 6/243 (2%) Strand=Plus/Minus Query 30837 GTCTTGAGACCCTTCTTCCATGCATAGAACAGCATGGAAGACATTGACTTCATAGAGG-- 30894 ||||| || ||||||||||| | ||||| ||||||| | || ||| ||| Sbjct 588919 GTCTTCAGTCCCTTCTTCCAACCGTAGAAGTGCATGGAGGTCA---ACTGGGAGAAGGAT 588863 Query 30895 GCGCT-GCAACGAAGAGGTTCATGCTCTGTGTCTGGTCAACAAACGGACCGCGGTCTGCT 30953 | | | |||| || ||||| | || | |||||| | || | ||| ||||| || Sbjct 588862 GGGTTCGCAAGATGGATGTTCAGGGATTGGGACTGGTCGATGAAAGCACCACGGTCGGCA 588803 Query 30954 GCAAGGTCAATGACGGTCTTCATAGACAGCTCCCATGCGGTCTTGTAGATTGCCTTGAGC 31013 |||||||| ||||||| |||| || | |||||| ||||||||||||| ||||||||| Sbjct 588802 GCAAGGTCGATGACGGCCTTCTGGGAGATCTCCCACACGGTCTTGTAGATAGCCTTGAGC 588743 Query 31014 TCAGGGTGGATGCCAATGACACGTTGGATGGACCCCCCGTTGGCAATAATCTGGTTCTTC 31073 || | ||||| || ||| || || || ||| || || ||| ||||||| Sbjct 588742 TCTGCCGGGATGTTGGGGATGTTTTGAATAGATCCACCGGCAGCGATGATCAAGTTCTTC 588683 Query 31074 ATG 31076 ||| Sbjct 588682 ATG 588680 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921621731823760