Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phaeotremella_20skinneri_20[genbank_20GCA_5F001599695.1_202016-03-
01] 58 sequences; 20,788,256 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq15 163 5e-35
seq7 158 2e-33
seq1 141 2e-28
seq12 87.8 3e-12
seq5 87.8 3e-12
>seq15
Length=579413
Score = 163 bits (180), Expect = 5e-35
Identities = 161/208 (77%), Gaps = 0/208 (0%)
Strand=Plus/Plus
Query 68234 TCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGA 68293
||| || ||||| || | || | |||||| || || |||||||||||||| || || ||
Sbjct 37582 TCCACCACGAAGACGGAGGACAAGGTGTAGAGTAGATTCTTTTTGGATGTTGTAGTCCGA 37641
Query 68294 GAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGG 68353
|| ||||| ||||| || |||||||||||||| || || | || |||||||| || ||
Sbjct 37642 AAGAGTCCTTCCATCCTCCAACTGCTTCCCGGCAAAGATCAACCTCTGTTGGTCTGGGGG 37701
Query 68354 AATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTAC 68413
|||||| |||||||| || || || | ||| ||| |||||||| || | ||||| ||
Sbjct 37702 AATGCCCTCCTTGTCCTGGATTTTCGACTTCACGTTGTCGATGGTATCAGACGATTCAAC 37761
Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGAGG 68441
|||| |||||||| |||||||| |||
Sbjct 37762 CTCCAGTGTGATGGTCTTTCCCGTTAGG 37789
Score = 158 bits (174), Expect = 2e-33
Identities = 171/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || || || | |||||||| ||||| |||||||| ||||| || || || |||
Sbjct 38096 CCACCACGGAGACGGAGGACCAAGTGAAGCGTCGACTCTTTCTGGATATTGTAGTCCGAG 38155
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | || ||||| | |||||| |||||||| || || | |||||||| || ||
Sbjct 38156 AGGGTTCGGCCGTCTTCCAGCTGCTTTCCGGCGAAGATCAGACGCTGTTGGTCTGGGGGG 38215
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|| || || ||||| |||||||| | || || ||||||||||| | || || ||
Sbjct 38216 ATACCCTCTTTGTCCTGAATCTTCGATTTCACATTGTCGATGGTGTCAGAAGACTCAACC 38275
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | |||||||| ||||| || || ||||||||||| ||||||||
Sbjct 38276 TCAAGAGTGATGGTCTTTCCGGTAAGAGTCTTGACGAAGATCTGCAT 38322
Score = 134 bits (148), Expect = 3e-26
Identities = 136/177 (77%), Gaps = 0/177 (0%)
Strand=Plus/Plus
Query 68286 TAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGG 68345
|| ||||| || || | || || || | |||||| || ||||| || | | ||||||
Sbjct 38423 TAGTCGGACAGGGTTCGTCCGTCCTCAAGCTGCTTTCCAGCGAAAATCAAACGCTGTTGG 38482
Query 68346 TCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT 68405
|| || |||||||| |||||||| |||||||| | ||||||| |||||||||||||
Sbjct 38483 TCTGGAGGAATGCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCGATGGTGTCTGAG 38542
Query 68406 GATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462
|| || || |||| |||||||| || || || |||||||| ||||| || ||||||
Sbjct 38543 GACTCGACCTCCAGAGTGATGGTCTTGCCGGTAAGGGTCTTAACGAAGATTTGCATT 38599
Score = 116 bits (128), Expect = 7e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || || |||| || | || || || ||||| || ||||| || || || ||
Sbjct 37868 CCACCACGGAGACGCAGGACAAGATGAAGTGTAGACTCCTTCTGGATATTGTAGTCCGAC 37927
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
| || | |||||| || |||||||| |||||||| || || | || ||||| || ||
Sbjct 37928 AAAGTGCGCCCATCCTCCAACTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGG 37987
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|| || |||||||| || || || | || || || ||||| || | || || ||
Sbjct 37988 ATACCCTCCTTGTCCTGGATTTTGGATTTCACATTGTCTATGGTATCCGAAGACTCCACC 38047
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | || ||||| ||||| || || ||||||||||| ||||||||
Sbjct 38048 TCAAGAGTAATGGTCTTTCCGGTAAGAGTCTTGACGAAGATCTGCAT 38094
Score = 84.2 bits (92), Expect = 4e-11
Identities = 163/234 (70%), Gaps = 9/234 (4%)
Strand=Plus/Minus
Query 10253 GTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGACAAACCCAGACCGGGCATGAGCCC 10312
||| || |||||||| ||| ||||| ||||||||| || || ||||||||||| ||
Sbjct 218557 GTGCAGACCCTCGTCTCGGGAGATGAGCTCGTTGGAGAAGGTCAATCCGGGCATGAGACC 218498
Query 10313 CCGGTTGCGCAGCCAGAAAATGGCGCAGAACGACCCGGAGAACAGAAGACCCTCCACGCA 10372
|| || ||||||||| |||| ||| || |||||||| | | |||||| |||
Sbjct 218497 ACGCTTCTTCAGCCAGAAGATGGAAGCGAAGGAACCGGAGAAGAAGATACCCTCAACGGC 218438
Query 10373 CACCCAGGCGACGAGGCGCTCTGCGAAGGAGCGGTCGCGC----GAAAAGTATTTCGAG- 10427
| |||||| || || || || |||| || |||| | || | | || |||
Sbjct 218437 GGCAAAGGCGATTAGTCGTTCGGCAAAGG-TCGATCGCTCATCAGAGATCCACTT-GAGA 218380
Query 10428 GCCCACGCTGCCTTCTTTCCCACGGCA-GGGATCGTCTCGATAGCCTCGAAGAG 10480
||||| | || ||| || || ||| ||||| || ||||| || ||||||||
Sbjct 218379 GCCCA-GTTGGCTTTCTTGGCAATGCAGGGGATGGTGTCGATGGCTTCGAAGAG 218327
>seq7
Length=1014673
Score = 158 bits (174), Expect = 2e-33
Identities = 337/491 (69%), Gaps = 18/491 (4%)
Strand=Plus/Minus
Query 268247 TGGAGCATTTTCCACATTGCTTCGACATAGTCCCGCGCATGGCCCCAATCGCGCTTTGCG 268306
|||||||| ||||||| |||| |||||||| |||||||||||||| | || |
Sbjct 187711 TGGAGCATCAGCCACATTCCTTCCACATAGTCTTTAGCATGGCCCCAATCTCTTTTCGAA 187652
Query 268307 TCCATGTTCCCGAGGAACAGGCATTTCT---GCTTGCCG--AGCT-TCACGCGTGCAAGA 268360
| || ||||| | ||| || ||| | || || |||| | || || |
Sbjct 187651 TGGATATTCCCCAAATACA---ATGTCTCTAGTTTCCCTGCAGCTATTTCG---GCTACC 187598
Query 268361 CCGCGAGTGATTTTTCGGGTCACGAACGTCTCG-CCACGTAGAGGGCTCTCGTGGTTGAA 268419
| |||| || ||||| || || || || ||| || || |||| ||||||||||||
Sbjct 187597 GCTCGAGAAATCTTTCGTGTTACAAATGT-TCGACCTCGGCGAGGTGACTCGTGGTTGAA 187539
Query 268420 GAGGATGCCGTTGCACGCGAACATGCCATATGCCTCACGGTAGTTCACGACCGTCCAGTA 268479
|| || |||||||| | |||||| ||||||| || ||||| || ||||| ||||| |
Sbjct 187538 CAGAATCCCGTTGCATGTGAACATTCCATATGATTCCCGGTAATTGACGACGATCCAGAA 187479
Query 268480 TGCAAACATCTTTGCAACTGCGTACGGAGAACGTGGATGGAAGGGCGTCGTGATCT-TTT 268538
||| ||| ||||| || |||| || || | || | ||| || ||||| ||| | |
Sbjct 187478 TGCGTACAGTTTTGCCACGCCGTATGGCGACCTAGGGTAGAATGGGGTCGT-CTCTGTCT 187420
Query 268539 GAGGGATTTCTCGGACTTTGCCAAAGAGCTCGGAGGTCGATGCTTGGTAGAA-CTTTGTT 268597
| ||| |||| ||||| || | | || ||||| || || || ||||| | |
Sbjct 187419 GCGGGGTTTCGACCACTTTACCGTACAATTCAGAGGTAGAAGCCTGATAGAATCGGACAT 187360
Query 268598 GTTTTTTCGAGACCGCAGATTCGGATTGCCTCGAGCAAACGAAGAGTTCCCATGCCATCC 268657
| || || | ||||| | |||||||| ||||| | ||| ||||| || | ||||||
Sbjct 187359 G-CTTCTCCAACCCGCAAGTCCGGATTGCATCGAGTAGACGCAGAGTCCCTAGGCCATCG 187301
Query 268658 ACGTCCGCTGTATACTCCGGCATCTCGAATGACACCTGGACATGGCTCTGGGCGCCCAGG 268717
|| || | || || |||| ||| ||||||||||| | |||||| ||| || || ||
Sbjct 187300 ACATCGCCGGTGTATTCCGCCATTTCGAATGACACTTTGACATGAGACTGAGCTCCGAGA 187241
Query 268718 TTATAAACCTC 268728
|| || | |||
Sbjct 187240 TTGTAGATCTC 187230
>seq1
Length=3245857
Score = 141 bits (156), Expect = 2e-28
Identities = 147/193 (76%), Gaps = 0/193 (0%)
Strand=Plus/Minus
Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308
||| |||| ||| || || ||||| || |||||||| || |||||||| || | |||||
Sbjct 3091568 CAACACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTACGTCCATC 3091509
Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368
|| | ||| || || || || ||||| | |||||||| || || || || ||||||||
Sbjct 3091508 CTCGAGCTGTTTACCAGCAAAGATGAGACGCTGTTGGTCTGGGGGGATACCCTCCTTGTC 3091449
Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428
|| ||||| | ||||||| ||||||||||| | || || || || | |||||||||
Sbjct 3091448 CTGGATCTTGGACTTGACGTTGTCGATGGTGTCCGAAGACTCAACCTCGAGGGTGATGGT 3091389
Query 68429 TTTTCCCGTGAGG 68441
||| ||||| |||
Sbjct 3091388 TTTGCCCGTAAGG 3091376
Score = 114 bits (126), Expect = 2e-20
Identities = 144/195 (74%), Gaps = 2/195 (1%)
Strand=Plus/Minus
Query 225449 AGGAAGCCAGAGTCGTGGGACACAATGATGGACG-ACACGTTCGTCAGGCCCTTGAGGTG 225507
|||||| | ||||||||||||||||||||||| | |||| | || ||| | ||||
Sbjct 2634776 AGGAAGTCTGAGTCGTGGGACACAATGATGGAGGTACAC-TGAGTGAGGGAGGTCAGGTA 2634718
Query 225508 CGTGATGAGCCATGCCACGTTGCTGACGTCCATGTGGTTTGTAGGTTCGTCCAGAAGCAG 225567
|||||||| | |||||| ||| |||| |||||| || || ||||| || | ||
Sbjct 2634717 GTCAATGAGCCAGGTGACGTTGAGGACATCCAAGTGGTTGGTGGGCTCGTCAAGCAAAAG 2634658
Query 225568 GATGTCAGCATCAATGAGGATGGCGCGCGTGAGAGACAGCTTCATTTTCCAGCCCCCGGA 225627
||||| || | | |||||||| || | || | || |||||| ||||| || |||||
Sbjct 2634657 AATGTCGGCCTTGAACAGGATGGCACGAGCAAGGGCCAACTTCATCTTCCATCCACCGGA 2634598
Query 225628 CAGGGAGCCGATTGA 225642
||||||||||| ||
Sbjct 2634597 AAGGGAGCCGATAGA 2634583
>seq12
Length=702644
Score = 87.8 bits (96), Expect = 3e-12
Identities = 108/148 (73%), Gaps = 0/148 (0%)
Strand=Plus/Minus
Query 68294 GAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGG 68353
||| ||||| || || || | ||| ||||||||||| || | || || ||||| || ||
Sbjct 575079 GAGAGTCCTGCCGTCCTCGAGCTGTTTCCCGGCGAAAATCAATCGCTGCTGGTCTGGGGG 575020
Query 68354 AATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTAC 68413
|| || || ||||| || || || | ||||| ||||| ||||| | || || ||
Sbjct 575019 GATACCCTCTTTGTCCTGGATTTTGGATTTGACATTGTCGATCGTGTCCGAAGACTCGAC 574960
Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGAGG 68441
|| | ||||||||| || |||||||||
Sbjct 574959 CTCGAGGGTGATGGTCTTGCCCGTGAGG 574932
>seq5
Length=1078720
Score = 87.8 bits (96), Expect = 3e-12
Identities = 167/243 (69%), Gaps = 6/243 (2%)
Strand=Plus/Minus
Query 30837 GTCTTGAGACCCTTCTTCCATGCATAGAACAGCATGGAAGACATTGACTTCATAGAGG-- 30894
||||| || ||||||||||| | ||||| ||||||| | || ||| |||
Sbjct 588919 GTCTTCAGTCCCTTCTTCCAACCGTAGAAGTGCATGGAGGTCA---ACTGGGAGAAGGAT 588863
Query 30895 GCGCT-GCAACGAAGAGGTTCATGCTCTGTGTCTGGTCAACAAACGGACCGCGGTCTGCT 30953
| | | |||| || ||||| | || | |||||| | || | ||| ||||| ||
Sbjct 588862 GGGTTCGCAAGATGGATGTTCAGGGATTGGGACTGGTCGATGAAAGCACCACGGTCGGCA 588803
Query 30954 GCAAGGTCAATGACGGTCTTCATAGACAGCTCCCATGCGGTCTTGTAGATTGCCTTGAGC 31013
|||||||| ||||||| |||| || | |||||| ||||||||||||| |||||||||
Sbjct 588802 GCAAGGTCGATGACGGCCTTCTGGGAGATCTCCCACACGGTCTTGTAGATAGCCTTGAGC 588743
Query 31014 TCAGGGTGGATGCCAATGACACGTTGGATGGACCCCCCGTTGGCAATAATCTGGTTCTTC 31073
|| | ||||| || ||| || || || ||| || || ||| |||||||
Sbjct 588742 TCTGCCGGGATGTTGGGGATGTTTTGAATAGATCCACCGGCAGCGATGATCAAGTTCTTC 588683
Query 31074 ATG 31076
|||
Sbjct 588682 ATG 588680
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921621731823760
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